BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZG01RM1.SCF screened BAC_end (859 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1381 1558 0.0 >3x_Contig1381 Length = 7318 Score = 1558 bits (786), Expect = 0.0 Identities = 807/812 (99%), Gaps = 2/812 (0%) Strand = Plus / Minus Query: 49 tcaccttttctcgttcctgacttatacctagtttcagttttttttttctttcttctttct 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3744 tcaccttttctcgttcctgacttatacctagtttcagttttttttttctttcttctttct 3685 Query: 109 ttcttcttccgctttagtttgagcgctgacacttcaggtcacgtgacgagaatttttgga 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3684 ttcttcttccgctttagtttgagcgctgacacttcaggtcacgtgacgagaatttttgga 3625 Query: 169 ccctcgtacatgtttagcatgacacaaaacgtgataggacttaaggaagagcatcgtact 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3624 ccctcgtacatgtttagcatgacacaaaacgtgataggacttaaggaagagcatcgtact 3565 Query: 229 atacccctgcgagcatctaatatggcgggaaaactgtatcagtagacaaacgggaactgt 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3564 atacccctgcgagcatctaatatggcgggaaaactgtatcagtagacaaacgggaactgt 3505 Query: 289 tagctttactatatttacatacatatagttcatatgtgctttgcgatcaacggtaatttt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3504 tagctttactatatttacatacatatagttcatatgtgctttgcgatcaacggtaatttt 3445 Query: 349 ttgtaagtaaaagcagccaagacgaaatcaagcagatagtgacatatttcattatataaa 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3444 ttgtaagtaaaagcagccaagacgaaatcaagcagatagtgacatatttcattatataaa 3385 Query: 409 atctcgatatgataacgatgtatttctcacacaagaagatatcagccatcgttgtataaa 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3384 atctcgatatgataacgatgtatttctcacacaagaagatatcagccatcgttgtataaa 3325 Query: 469 gaaaccaagaggcgagcgtataatacacgctggacccagttcgctactgaatacgcatca 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3324 gaaaccaagaggcgagcgtataatacacgctggacccagttcgctactgaatacgcatca 3265 Query: 529 ttgcagtataaaatggagatcaagagcaaactggacggtattgaacctacacaggtagat 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3264 ttgcagtataaaatggagatcaagagcaaactggacggtattgaacctacacaggtagat 3205 Query: 589 agagccattttagagagtcaaaaagcaaaaagtggttcctatagtccatattcaaaattt 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3204 agagccattttagagagtcaaaaagcaaaaagtggttcctatagtccatattcaaaattt 3145 Query: 649 agggtcggatgttgcatactgac-anagatggtacttatatcacaggaagcaatgtggag 707 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 3144 agggtcggatgttgcatactgacaaaagatggtacttatatcacaggaagcaatgtggag 3085 Query: 708 aatgctacgtatggagccaccatatgtgcagaaagagctgctatcgtgaaagctgtcaca 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3084 aatgctacgtatggagccaccatatgtgcagaaagagctgctatcgtgaaagctgtcaca 3025 Query: 768 agcttccacagagcagattgggtttgtgtcgctatcaacagcgatatgagagat-attac 826 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 3024 agctcccacagagcagattgggtttgtgtcgctatcaacagcgatatgagagataattac 2965 Query: 827 attccgncatgtggaatctgtcggcaaacgat 858 |||||| ||||||||||||||||||||||||| Sbjct: 2964 attccgccatgtggaatctgtcggcaaacgat 2933 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7001 Number of Sequences: 1807 Number of extensions: 7001 Number of successful extensions: 111 Number of sequences better than 1.0e-20: 1 length of query: 859 length of database: 10,358,551 effective HSP length: 16 effective length of query: 843 effective length of database: 10,329,639 effective search space: 8707885677 effective search space used: 8707885677 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)