BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC4ZG04RM1.SCF screened BAC_end
         (873 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1432                                                        1441   0.0  

>3x_Contig1432 
          Length = 8634

 Score = 1441 bits (727), Expect = 0.0
 Identities = 769/781 (98%), Gaps = 4/781 (0%)
 Strand = Plus / Minus

                                                                        
Query: 49   taccaatcttgaaacgggctaaggatatgggacttccaatcaccgccgaaacttgcttcc 108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 taccaatcttgaaacgggctaaggatatgggacttccaatcaccgccgaaacttgcttcc 1758

                                                                        
Query: 109  attatctttcattggcagctgaaagggttcctaaatccaagactttttacaaatgttgtc 168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 attatctttcattggcagctgaaagggttcctaaatccaagactttttacaaatgttgtc 1698

                                                                        
Query: 169  caccgatacgtagtgagaagaacagaaaggaactttggagagccttaagagaaggtctaa 228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1697 caccgatacgtagtgagaagaacagaaaggaactttggagagccttaagagaaggtctaa 1638

                                                                        
Query: 229  tcacttctgtagtaagtgaccattctccatgtataccggagctaaaagacctcgcaaaag 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1637 tcacttctgtagtaagtgaccattctccatgtataccggagctaaaagacctcgcaaaag 1578

                                                                        
Query: 289  gtgatttttttagtgcatggggaggaattgcatccgtcgggttgggactaccattactat 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1577 gtgatttttttagtgcatggggaggaattgcatccgtcgggttgggactaccattactat 1518

                                                                        
Query: 349  acactaacggtgcttccatcgctgaaatcattcaatggtgttgcgagaacaccagtaagc 408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 acactaacggtgcttccatcgctgaaatcattcaatggtgttgcgagaacaccagtaagc 1458

                                                                        
Query: 409  aagttggtcttgatcacaggaagggtttcctaagaactggatacgacgcagattttgtta 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 aagttggtcttgatcacaggaagggtttcctaagaactggatacgacgcagattttgtta 1398

                                                                        
Query: 469  tcttcgacatcaatacctatcagactgtcgacaacgataaagtttatttcaaaaacaaac 528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 tcttcgacatcaatacctatcagactgtcgacaacgataaagtttatttcaaaaacaaac 1338

                                                                        
Query: 529  tgacagcctatgatgggttcaaactgaaaggtttagtgagaaacacctatgttagaggaa 588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 tgacagcctatgatgggttcaaactgaaaggtttagtgagaaacacctatgttagaggaa 1278

                                                                        
Query: 589  aattggcttttgaacttgacggcatgggacataataaaaaccctcccggccagacaattc 648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 aattggcttttgaacttgacggcatgggacataataaaaaccctcccggccagacaattc 1218

                                                                        
Query: 649  ttgaacgcagaagaacatgaagtaccccatcttcttatcatttttttttcttcaattttg 708
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1217 ttgaacgcagaagaacatgaagtaccccatcttctaatcatttttttttcttcaattttg 1158

                                                                        
Query: 709  gaataccttttattgatgcatgatatacatattatatatatattacttatgatttaaatt 768
             | |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1157 aattacctttatttgatgcatgatatacatattatatatatatcacttatgatttaaatt 1098

                                                                        
Query: 769  tacctagaatatacttcatttatttataatttctagaacagcaattcggtcggtacaaga 828
            ||||||||||||||||||||   ||||||||||||||||||||||   ||||||||||||
Sbjct: 1097 tacctagaatatacttcatt--attataatttctagaacagcaat--cgtcggtacaaga 1042

             
Query: 829  a 829
            |
Sbjct: 1041 a 1041


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9592
Number of Sequences: 1807
Number of extensions: 9592
Number of successful extensions: 101
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)