BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZG06RM1.SCF screened BAC_end (1149 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1656 759 0.0 >3x_Contig1656 Length = 14482 Score = 759 bits (383), Expect = 0.0 Identities = 399/405 (98%) Strand = Plus / Plus Query: 75 cttgacccattggagacacctttcggaagcattgagccgntaggttttgaaagatttaag 134 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2557 cttgacccattggagacacctttcggaagcattgagccgttaggttttgaaagatttaag 2616 Query: 135 atttgcgaacttgttgctgaacttttacactgctcgaacatgggattgttaggtgaacca 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2617 atttgcgaacttgttgctgaacttttacactgctcgaacatgggattgttaggtgaacca 2676 Query: 195 tcaggagaggctattgtacttgaacgagacttgaaaagagaagagattttgaaagaaatg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2677 tcaggagaggctattgtacttgaacgagacttgaaaagagaagagattttgaaagaaatg 2736 Query: 255 gaagaacagcttgagaatgaaaacgcatctgatgcagaaactggatattatgacggtgaa 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2737 gaagaacagcttgagaatgaaaacgcatctgatgcagaaactggatattatgacggtgaa 2796 Query: 315 gatgatactgctcatgctaataatcttcatatggaattacaagaccttaatataaatgcg 374 ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 2797 gatgatactgctcatgctaataatcttcatagggaattacaagacctcaatataaatgcg 2856 Query: 375 acgctgaaagactctgaagctactgatgaagtanaggacgtctaagatgttggagatgct 434 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2857 acgctgaaagactctgaagctactgatgaagtagaggacgtcaaagatgttggagatgct 2916 Query: 435 gtagatgttgatgcttccttggctgaaagaacagatatacattcc 479 | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2917 ggagatgttgatgcttccttggctgaaagaacagatatacattcc 2961 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 28,848 Number of Sequences: 1807 Number of extensions: 28848 Number of successful extensions: 1208 Number of sequences better than 1.0e-20: 1 length of query: 1149 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1133 effective length of database: 10,329,639 effective search space: 11703480987 effective search space used: 11703480987 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)