BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZG10FM1.SCF screened BAC_end (884 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1749 1174 0.0 >3x_Contig1749 Length = 22923 Score = 1174 bits (592), Expect = 0.0 Identities = 648/662 (97%), Gaps = 4/662 (0%) Strand = Plus / Minus Query: 86 gatatcgattgtgataaatttgggtcacacttacaggaaacttggtgaggacgaaagagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20456 gatatcgattgtgataaatttgggtcacacttacaggaaacttggtgaggacgaaagagc 20397 Query: 146 catcaaatgctttaagaccgtattagagagtagtaaacctactgccactttatggtgttc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20396 catcaaatgctttaagaccgtattagagagtagtaaacctactgccactttatggtgttc 20337 Query: 206 cttagggtttctatatttaagaatgaaaaaaattgaaaaggcaatcgatagttttcataa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20336 cttagggtttctatatttaagaatgaaaaaaattgaaaaggcaatcgatagttttcataa 20277 Query: 266 agctctagcgctggaccaaggtaaccaggcatcaaataaactattgaagactgccttaga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20276 agctctagcgctggaccaaggtaaccaggcatcaaataaactattgaagactgccttaga 20217 Query: 326 gatcaatgcacatatgataattgatgagaatcaccctatggtaatttcatcgaacattca 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20216 gatcaatgcacatatgataattgatgagaatcaccctatggtaatttcatcgaacattca 20157 Query: 386 aaatattccgacgtcacatgtatcaaagaatgataagaaaagaacatcattgggaattac 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20156 aaatattccgacgtcacatgtatcaaagaatgataagaaaagaacatcattgggaattac 20097 Query: 446 tagttttgatcccgtcaccgaggcaaaacggttaaaacaaggtatttcagatcacgaggg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20096 tagttttgatcccgtcaccgaggcaaaacggttaaaacaaggtatttcagatcacgaggg 20037 Query: 506 cgattcaatggacattgaacaataaaagtaacatttatattcttgcatatatagcttaat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20036 cgattcaatggacattgaacaataaaagtaacatttatattcttgcatatatagcttaat 19977 Query: 566 aggaaaagctcgcagttggaaaataacttgctagctttttcaagctgtcactctatgcct 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19976 aggaaaagctcgcagttggaaaataacttgctagctttttcaagctgtcactctatgcct 19917 Query: 626 gcgtncccacaggatctttngactctatgttcttttctatggctcttggatttttctttt 685 |||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||||||| Sbjct: 19916 gcgtccccacaggatctttggactctatgttc-tttctatggctcttgga-ttttctttt 19859 Query: 686 ttttcctcccgctggattttccttttttttttggcttctttggaatttaaggatttttca 745 ||| ||||||| ||||| |||||||| | | ||||| |||| |||| |||||||||| || Sbjct: 19858 tttccctcccg-tggatcttccttttctctctggctccttt-gaatctaaggattttcca 19801 Query: 746 ga 747 || Sbjct: 19800 ga 19799 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,288 Number of Sequences: 1807 Number of extensions: 10288 Number of successful extensions: 118 Number of sequences better than 1.0e-20: 1 length of query: 884 length of database: 10,358,551 effective HSP length: 16 effective length of query: 868 effective length of database: 10,329,639 effective search space: 8966126652 effective search space used: 8966126652 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)