BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZG11RM1.SCF screened BAC_end (982 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1460 926 0.0 >3x_Contig1460 Length = 9157 Score = 926 bits (467), Expect = 0.0 Identities = 549/567 (96%), Gaps = 7/567 (1%) Strand = Plus / Plus Query: 44 tggcgcttcatatcctaaccattagcacttagactgcttcaatcctgatggcgctaactt 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7782 tggcgcttcatatcctaaccattagcacttagactgcttcaatcctgatggcgctaactt 7841 Query: 104 cattactcgtcctatctgtcattctttgttctgcctccagcttttactgtcataattgga 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7842 cattactcgtcctatctgtcattctttgttctgcctccagcttttactgtcataattgga 7901 Query: 164 ctttatctccttacccgattgggacattctaagcgatcaatctagtgctttctttctcaa 223 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 7902 ctttatctccttacccgattgggacattctaagcgatcaatctagtgcaacctcgctcaa 7961 Query: 224 ggatcaaatgacgatatgatataaacacaagtacaaaagaaagcccataagcgtctaacg 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7962 ggatcaaatgacgatatgatataaacacaagtacaaaagaaagcccataagcgtctaacg 8021 Query: 284 tttctcccaggttattatcttaacctattcgtccatgtgaatcatactagcaccgaacag 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8022 tttctcccaggttattatcttaacctattcgtccatgtgaatcatactagcaccgaacag 8081 Query: 344 attatcaacaatttactcctctatagtgtcacttttggatataagttggaagcattttga 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8082 attatcaacaatttactcctctatagtgtcacttttggatataagttggaagcattttga 8141 Query: 404 accagaactttccccagaaacagaaaatcagaaattaaggcatcactgtaaaatcaaata 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8142 accagaactttccccagaaacagaaaatcagaaattaaggcatcactgtaaaatcaaata 8201 Query: 464 gtagatttgaaagcttcatgcataacatacaacatttttacgtaacttgaattagaacag 523 ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| Sbjct: 8202 gtagatttgaaagcttcatgcataacagacaaca-ttttacgtaac-tgaattagaacag 8259 Query: 524 ggatggcagtatgtcaagaatgaaaatttcagagtctactgatattagtttcctgtgacc 583 ||||||||| | |||||||||| ||||||||||||||||||||| ||| || |||||| | Sbjct: 8260 ggatggcag-aagtcaagaatg-aaatttcagagtctactgatagtag-ttactgtga-c 8315 Query: 584 agctaatatgaatactttaaatgacag 610 ||| || ||| |||||||||||||||| Sbjct: 8316 agcaaagatg-atactttaaatgacag 8341 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7480 Number of Sequences: 1807 Number of extensions: 7480 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 982 length of database: 10,358,551 effective HSP length: 16 effective length of query: 966 effective length of database: 10,329,639 effective search space: 9978431274 effective search space used: 9978431274 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)