BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC4ZH08FM1.SCF screened BAC_end (996 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1672 694 0.0 >3x_Contig1672 Length = 13609 Score = 694 bits (350), Expect = 0.0 Identities = 390/401 (97%), Gaps = 2/401 (0%) Strand = Plus / Plus Query: 87 cgacacttacctcgtccaccacttgcttccccataagataagtgttatgagatgatgata 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6923 cgacacttacctcgtccaccacttgcttccccataagataagtgttatgagatgatgata 6982 Query: 147 tgaaatattcgtttagcggtctagaataatcttcttcgaataattgtaggaacggttgtt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6983 tgaaatattcgtttagcggtctagaataatcttcttcgaataattgtaggaacggttgtt 7042 Query: 207 ttgttaagatntttttttaaccctcaacatctaaaagttcatcagcggtgcaatactttt 266 ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 7043 ttgttaagaattttaataaaccctcaacatctaaaagttcatcagcggtgcaatactttt 7102 Query: 267 tgaaaatcttataagcattagtctgtgatattacttcaccttgaacgtcacatatgaact 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7103 tgaaaatcttataagcattagtctgtgatattacttcaccttgaacgtcacatatgaact 7162 Query: 327 ggtaaaagctttgaaagtcaaccaccttagtatccttatttttcatttgattccagatta 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7163 ggtaaaagctttgaaagtcaaccaccttagtatccttatttttcatttgattccagatta 7222 Query: 387 tttcaatctccggcctagctttttagtacttgacaaaattttggaattc-gggaaaataa 445 ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||| ||| Sbjct: 7223 tttcaatctccggcctagcttttaagtacttgacaaaatcttggaattcggggaaattaa 7282 Query: 446 gcaaactgttattgttagtgtccgcttttaataaaaagtgc 486 ||||||||||||||||||||||||| |||||| |||||||| Sbjct: 7283 gcaaactgttattgttagtgtccgc-tttaatgaaaagtgc 7322 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 19,840 Number of Sequences: 1807 Number of extensions: 19840 Number of successful extensions: 252 Number of sequences better than 1.0e-20: 1 length of query: 996 length of database: 10,358,551 effective HSP length: 16 effective length of query: 980 effective length of database: 10,329,639 effective search space: 10123046220 effective search space used: 10123046220 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)