BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZA05RM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1591 1683 0.0 >3x_Contig1591 Length = 14045 Score = 1683 bits (849), Expect = 0.0 Identities = 873/879 (99%), Gaps = 2/879 (0%) Strand = Plus / Plus Query: 48 agcctattatcctaactgtcattttattaacttgggattgtatctatacaatgaactccc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 agcctattatcctaactgtcattttattaacttgggattgtatctatacaatgaactccc 733 Query: 108 aatggaggtcccatttgaaaggtatcactgaacttttcaagaagatcaattcaggaaact 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 aatggaggtcccatttgaaaggtatcactgaacttttcaagaagatcaattcaggaaact 793 Query: 168 catcaaaagtgctaaatgtcgcgaaatgttggtttaaggttatggagacttttgcaagta 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 catcaaaagtgctaaatgtcgcgaaatgttggtttaaggttatggagacttttgcaagta 853 Query: 228 ttagtaccgtgctaggtggtgcacttgttgaggaaacagacttggacgcgatttttgatc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 ttagtaccgtgctaggtggtgcacttgttgaggaaacagacttggacgcgatttttgatc 913 Query: 288 catacgatttcca-gtatgtcgagtcgttgaagtctctaaatatcacaacctcgttgaat 346 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 catacgatttccatgtatgtcgagtcgttgaagtctctaaatatcacaacctcgttgaat 973 Query: 347 gagttcaatcttttacggggtcacaacgaagagtttgatcttgttatcaaagaggtcttc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 gagttcaatcttttacggggtcacaacgaagagtttgatcttgttatcaaagaggtcttc 1033 Query: 407 aaaagtttgaacttgattaggtctttggagaagacaagcatggacgggaataaaggtgga 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 aaaagtttgaacttgattaggtctttggagaagacaagcatggacgggaataaaggtgga 1093 Query: 467 atgatcaataaaaacatagactatttactcttctttgactctcactctgaagcctatatg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1094 atgatcaataaaaacatagactatttactcttctttgactctcactctgaagcctatatg 1153 Query: 527 aacaagctctcttatttcaagatacagaaaatcatcgtggaaattgataagcagcttgaa 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 aacaagctctcttatttcaagatacagaaaatcatcgtggaaattgataagcagcttgaa 1213 Query: 587 tatcaattcattgacaaatccggtgtaatacctgcagataatcaatcacatccttctaac 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1214 tatcaattcattgacaaatccggtgtaatacctgcagataatcaatcacatccttctaac 1273 Query: 647 agcaaaatactagatcatgcaatagatcttgttactctaaaaaatggagatgtcattgcg 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 agcaaaatactagatcatgcaatagatcttgttactctaaaaaatggagatgtcattgcg 1333 Query: 707 ataagctggtatgatatttctcatcaaactcaagntctatctttcttattgattgtttta 766 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1334 ataagctggtatgatatttctcatcaaactcaagttctatctttcttattgattgtttta 1393 Query: 767 ctaaaactacttggtattccaaaagagtccattgctgtacagcaagttgttaagcgtatc 826 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 ctaaaactacttggtattccaaaagagtccattgctgtacagcaagttgttaagcgtatc 1453 Query: 827 atgtccttatttccgatttttggatagtgatcaaccaccagttaatctaaagacctgtta 886 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1454 atgtcctta-ttccgatttttggatagtgatcaaccaccagttaatctaaggacctgtta 1512 Query: 887 ttctaactttgcanggcttattgccgggctaaatgcgat 925 ||||||||||||| |||||||||||||||||||||||| Sbjct: 1513 ttctaactttgcagtgcttattgccgggctaaatgcgat 1551 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6955 Number of Sequences: 1807 Number of extensions: 6955 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)