BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZA09RM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1604 1475 0.0 >3x_Contig1604 Length = 15703 Score = 1475 bits (744), Expect = 0.0 Identities = 847/870 (97%), Gaps = 9/870 (1%) Strand = Plus / Minus Query: 47 cttcgtcatatctaccaaactttgtagtagaatttgaagggttaagcgcaaccgctgtaa 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14476 cttcgtcatatctaccaaactttgtagtagaatttgaagggttaagcgcaaccgctgtaa 14417 Query: 107 ctattccttctagtcgtctttttgtttcttgtaattcttggtcctttctctttaatgaat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14416 ctattccttctagtcgtctttttgtttcttgtaattcttggtcctttctctttaatgaat 14357 Query: 167 ctgataacttacaaaatattatttccagggatgccggtatctggatttcagaatcgaaag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14356 ctgataacttacaaaatattatttccagggatgccggtatctggatttcagaatcgaaag 14297 Query: 227 taagagcctttgatttcttcattttctgctcttcttgctgcttgaaagtcaaaccctgat 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14296 taagagcctttgatttcttcattttctgctcttcttgctgcttgaaagtcaaaccctgat 14237 Query: 287 tgaatacctccttcaatttttttatctctatttctaacgattctatctgtgtctctttca 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14236 tgaatacctccttcaatttttttatctctatttctaacgattctatctgtgtctctttca 14177 Query: 347 actgtagttcaagtttgaagttgtctgatgatggctctgtttcagagtcgaaagtggtat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14176 actgtagttcaagtttgaagttgtctgatgatggctctgtttcagagtcgaaagtggtat 14117 Query: 407 tgaatcctgagcttttagcatatgatgatctgtccattattaccgtgttatttgaagagc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14116 tgaatcctgagcttttagcatatgatgatctgtccattattaccgtgttatttgaagagc 14057 Query: 467 ttccaggatgcgtgtttgacgaaatgcctct-cgaggactctat-ctcgggcgaattatg 524 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 14056 ttccaggatgcgtgtttgacgaaatgcctctgcgaggactctatgctcgggcgaattatg 13997 Query: 525 ttgttctatgagcggctgttcccaata-tgatgacatgc-tgctccta-tgagtagaaga 581 ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 13996 ttgttctatgagcggctgttcccaatagtgatgacatgcgtgctcctagtgagtagaaga 13937 Query: 582 tccgctcaaatggccctgaagtccttggttatagtgggagcccataccatcaatgttccc 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13936 tccgctcaaatggccctgaagtccttggttatagtgggagcccataccatcaatgttccc 13877 Query: 642 atgtaagctgaagctacctccatgt-gccatgctggagttcatgacattnggcggttgtg 700 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 13876 atgtaagctgaagctacctccatgtggccatgctggagttcatgacatt-ggcggttgtg 13818 Query: 701 ccatacaatttgnactcgtcagaactaccaaaattcagattggcgaaagagttatccaaa 760 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13817 ccatacaatttggactcgtcagaactaccaaaattcagattggcgaaagagttatccaaa 13758 Query: 761 ctctgtttgttatattcaggttgctacacgataacattgacctgttagtaaaaggtt-at 819 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 13757 ctctgttggttatattcaggttgctacacgataacattgacctgttagtaaaaggttaat 13698 Query: 820 tatgagtttagaacatttatagtctcaatttgggttggttcatgtttcatanaaaacagg 879 |||||||| |||||||||||||||||||| ||||| | ||||||||||| |||||||| Sbjct: 13697 tatgagttagaaacatttatagtctcaattt-ggttgttccatgtttcatagaaaacagg 13639 Query: 880 aacagacggaaccatatttgattaaaaatg 909 |||||| ||| || ||||||||||||| Sbjct: 13638 gacagacagaaacagtattgattaaaaatg 13609 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6846 Number of Sequences: 1807 Number of extensions: 6846 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)