BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC50ZA09RM1.SCF screened BAC_end
         (929 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1604                                                        1475   0.0  

>3x_Contig1604 
          Length = 15703

 Score = 1475 bits (744), Expect = 0.0
 Identities = 847/870 (97%), Gaps = 9/870 (1%)
 Strand = Plus / Minus

                                                                         
Query: 47    cttcgtcatatctaccaaactttgtagtagaatttgaagggttaagcgcaaccgctgtaa 106
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14476 cttcgtcatatctaccaaactttgtagtagaatttgaagggttaagcgcaaccgctgtaa 14417

                                                                         
Query: 107   ctattccttctagtcgtctttttgtttcttgtaattcttggtcctttctctttaatgaat 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14416 ctattccttctagtcgtctttttgtttcttgtaattcttggtcctttctctttaatgaat 14357

                                                                         
Query: 167   ctgataacttacaaaatattatttccagggatgccggtatctggatttcagaatcgaaag 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14356 ctgataacttacaaaatattatttccagggatgccggtatctggatttcagaatcgaaag 14297

                                                                         
Query: 227   taagagcctttgatttcttcattttctgctcttcttgctgcttgaaagtcaaaccctgat 286
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14296 taagagcctttgatttcttcattttctgctcttcttgctgcttgaaagtcaaaccctgat 14237

                                                                         
Query: 287   tgaatacctccttcaatttttttatctctatttctaacgattctatctgtgtctctttca 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14236 tgaatacctccttcaatttttttatctctatttctaacgattctatctgtgtctctttca 14177

                                                                         
Query: 347   actgtagttcaagtttgaagttgtctgatgatggctctgtttcagagtcgaaagtggtat 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14176 actgtagttcaagtttgaagttgtctgatgatggctctgtttcagagtcgaaagtggtat 14117

                                                                         
Query: 407   tgaatcctgagcttttagcatatgatgatctgtccattattaccgtgttatttgaagagc 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14116 tgaatcctgagcttttagcatatgatgatctgtccattattaccgtgttatttgaagagc 14057

                                                                         
Query: 467   ttccaggatgcgtgtttgacgaaatgcctct-cgaggactctat-ctcgggcgaattatg 524
             ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 14056 ttccaggatgcgtgtttgacgaaatgcctctgcgaggactctatgctcgggcgaattatg 13997

                                                                         
Query: 525   ttgttctatgagcggctgttcccaata-tgatgacatgc-tgctccta-tgagtagaaga 581
             ||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 13996 ttgttctatgagcggctgttcccaatagtgatgacatgcgtgctcctagtgagtagaaga 13937

                                                                         
Query: 582   tccgctcaaatggccctgaagtccttggttatagtgggagcccataccatcaatgttccc 641
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13936 tccgctcaaatggccctgaagtccttggttatagtgggagcccataccatcaatgttccc 13877

                                                                         
Query: 642   atgtaagctgaagctacctccatgt-gccatgctggagttcatgacattnggcggttgtg 700
             ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 13876 atgtaagctgaagctacctccatgtggccatgctggagttcatgacatt-ggcggttgtg 13818

                                                                         
Query: 701   ccatacaatttgnactcgtcagaactaccaaaattcagattggcgaaagagttatccaaa 760
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13817 ccatacaatttggactcgtcagaactaccaaaattcagattggcgaaagagttatccaaa 13758

                                                                         
Query: 761   ctctgtttgttatattcaggttgctacacgataacattgacctgttagtaaaaggtt-at 819
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 13757 ctctgttggttatattcaggttgctacacgataacattgacctgttagtaaaaggttaat 13698

                                                                         
Query: 820   tatgagtttagaacatttatagtctcaatttgggttggttcatgtttcatanaaaacagg 879
             ||||||||   |||||||||||||||||||| ||||| | ||||||||||| ||||||||
Sbjct: 13697 tatgagttagaaacatttatagtctcaattt-ggttgttccatgtttcatagaaaacagg 13639

                                           
Query: 880   aacagacggaaccatatttgattaaaaatg 909
              |||||| ||| ||   |||||||||||||
Sbjct: 13638 gacagacagaaacagtattgattaaaaatg 13609


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6846
Number of Sequences: 1807
Number of extensions: 6846
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)