BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC50ZA10FM1.SCF screened BAC_end
         (913 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1741                                                        1423   0.0  

>3x_Contig1741 
          Length = 21706

 Score = 1423 bits (718), Expect = 0.0
 Identities = 769/782 (98%), Gaps = 3/782 (0%)
 Strand = Plus / Minus

                                                                        
Query: 85   tcttccattgttaaatatacgtctgccgaattgacatctgaacaaaaagaaaaatgataa 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7828 tcttccattgttaaatatacgtctgccgaattgacatctgaacaaaaagaaaaatgataa 7769

                                                                        
Query: 145  gaatcacccgtaaactagtgaagataatataggtttctaggtcacgtattcagttcgtta 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7768 gaatcacccgtaaactagtgaagataatataggtttctaggtcacgtattcagttcgtta 7709

                                                                        
Query: 205  gcctgtaattgaactatgcgtccgtatcccttaaacgtgcccatccttggctttgctatg 264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7708 gcctgtaattgaactatgcgtccgtatcccttaaacgtgcccatccttggctttgctatg 7649

                                                                        
Query: 265  gtgctaatcggtcttatttctttttgaggctcaagcagaaagcactgctgctgggcaacg 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7648 gtgctaatcggtcttatttctttttgaggctcaagcagaaagcactgctgctgggcaacg 7589

                                                                        
Query: 325  agaattttcttccaagaatttctttatttctgttacattagaattggaaaaaaaacaaga 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7588 agaattttcttccaagaatttctttatttctgttacattagaattggaaaaaaaacaaga 7529

                                                                        
Query: 385  tattgatatacataaaacttggacgtacatgaacggttttatccttgcgatgagtgaata 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7528 tattgatatacataaaacttggacgtacatgaacggttttatccttgcgatgagtgaata 7469

                                                                        
Query: 445  cttacggaagtttgggactattgcatttgttcgtaagtgaaagtgagagaacttaatact 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7468 cttacggaagtttgggactattgcatttgttcgtaagtgaaagtgagagaacttaatact 7409

                                                                        
Query: 505  acatatatcctaatagtaaggtctaaccttcctgctgaactttgtagcagaggtttaaag 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7408 acatatatcctaatagtaaggtctaaccttcctgctgaactttgtagcagaggtttaaag 7349

                                                                        
Query: 565  agaactgagaacaagtttaaaagcgagaagagcttaataagcttatcaagattttttata 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7348 agaactgagaacaagtttaaaagcgagaagagcttaataagcttatcaagattttttata 7289

                                                                        
Query: 625  tcagagctctcggtcataggtcactgcgctccctttgagttttgaagagcagatgcgtac 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7288 tcagagctctcggtcataggtcactgcgctccctttgagttttgaagagcagatgcgtac 7229

                                                                        
Query: 685  acttaggtcgaggagtgataaaagtgagtctacttgtaatagtgccaggtcaagtgtgga 744
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7228 acttaggtcgaggagtgataaaagtgagtctacttgtaatagtgccagttcaagtgtgga 7169

                                                                        
Query: 745  tacaagaggaagaatgcagacaat-acttcagaagaacctgtgaagttataatacgaact 803
            |||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||||
Sbjct: 7168 tacaagaggaagaatgcagacaataactccagaagaacctgggaagttagaatacgaact 7109

                                                                        
Query: 804  ggatgcagcttttggtgcgggaaaatattaatgtagggtctagatcacaagtccatggcg 863
            ||||||||||| || |||||| ||||| ||||||  |||||||||||| |||| ||||||
Sbjct: 7108 ggatgcagcttctgctgcggg-aaataataatgttaggtctagatcac-agtcgatggcg 7051

              
Query: 864  ct 865
            ||
Sbjct: 7050 ct 7049


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6690
Number of Sequences: 1807
Number of extensions: 6690
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)