BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZA11RM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1296 1685 0.0 >3x_Contig1296 Length = 7334 Score = 1685 bits (850), Expect = 0.0 Identities = 866/869 (99%), Gaps = 2/869 (0%) Strand = Plus / Plus Query: 49 taacggataatttttattttcttcttttcaggtaataattaattgattaatttttaaaaa 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2369 taacggataatttttattttcttcttttcaggtaataattaattgattaatttttaaaaa 2428 Query: 109 gtacatgacagtatatggttaataattgggatgtctttatacgtccatctctcatatatg 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2429 gtacatgacagtatatggttaataattgggatgtctttatacgtccatctctcatatatg 2488 Query: 169 ttgctcactttgtaacgggacgaataagatgcaattaatcgctttgttgtgtgtctcctt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2489 ttgctcactttgtaacgggacgaataagatgcaattaatcgctttgttgtgtgtctcctt 2548 Query: 229 ggtatttcaacttcaagaagaaattcacgatgacagctaccaacaaaaagaaacatagca 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2549 ggtatttcaacttcaagaagaaattcacgatgacagctaccaacaaaaagaaacatagca 2608 Query: 289 aggtagggccaaatctatcatcatatggaccggatcctctgcgtctaattgcagccgctc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2609 aggtagggccaaatctatcatcatatggaccggatcctctgcgtctaattgcagccgctc 2668 Query: 349 tccaatggtacgtcaccaatgcataaatcatagttcccatcgctaccagtgtgaaaagtc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2669 tccaatggtacgtcaccaatgcataaatcatagttcccatcgctaccagtgtgaaaagtc 2728 Query: 409 cagcactgatacgaccaactttatccccgaaatttaacaaaccgacacctaaacctccaa 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2729 cagcactgatacgaccaactttatccccgaaatttaacaaaccgacacctaaacctccaa 2788 Query: 469 gcatcactgtgaagtttaaccatgataggaaagtacgttcgttggcgaaaaacaccttag 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2789 gcatcactgtgaagtttaaccatgataggaaagtacgttcgttggcgaaaaacaccttag 2848 Query: 529 gttcaactcttgttggcaaagcgatacgcttgccaggagctttctgtagtaaaggagcag 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2849 gttcaactcttgttggcaaagcgatacgcttgccaggagctttctgtagtaaaggagcag 2908 Query: 589 acatttctttctgtattgatagatgatgataatctttactttctgaactaaacaagaaaa 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2909 acatttctttctgtattgatagatgatgataatctttactttctgaactaaacaagaaaa 2968 Query: 649 ttcagatgtgtattaataaagactggaaggtgatcggcggaatcttctgtatcagatttt 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2969 ttcagatgtgtattaataaagactggaaggtgatcggcggaatcttctgtatcagatttt 3028 Query: 709 aatcttccttatatatgtgaatttgatagtttcggcagacanaaaaaagaactgatgcgt 768 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3029 aatcttccttatatatgtgaatttgatagtttcggcagacaaaaaaaagaactgatgcgt 3088 Query: 769 ttctgtaaaagtgcagttcccaattaataacccactcgtttaagtaccctctgttcccaa 828 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3089 ttctgtaaaagtgcagttcccaattaataacccactcgtttaagtaccctctgttcccaa 3148 Query: 829 c-atatatactatgttaaattaggacaagg-aaacagatcgctaacggtaaattatcagc 886 | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3149 caatatatactatgttaaattaggacaaggaaaacagatcgctaacggtaaattatcagc 3208 Query: 887 aggtgaataatttgtaccgttgatggatt 915 ||||||||||||||||||||||||||||| Sbjct: 3209 aggtgaataatttgtaccgttgatggatt 3237 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7028 Number of Sequences: 1807 Number of extensions: 7028 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)