BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC50ZB01FM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1733                                                        1568   0.0  

>3x_Contig1733 
          Length = 18615

 Score = 1568 bits (791), Expect = 0.0
 Identities = 819/827 (99%), Gaps = 1/827 (0%)
 Strand = Plus / Minus

                                                                        
Query: 85   accaaacttacctaccaacaaagggttgacttttcaaaacttagggaacaattgcttaca 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3627 accaaacttacctaccaacaaagggttgacttttcaaaacttagggaacaattgcttaca 3568

                                                                        
Query: 145  gcggaccgtagtgaaatccataatttacagaatgaacacgaaaggatacgtaaagatctg 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3567 gcggaccgtagtgaaatccataatttacagaatgaacacgaaaggatacgtaaagatctg 3508

                                                                        
Query: 205  gaaacgatgagaaataagctcagagaagaaatcacgaaggccaatgccggttttaaattg 264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3507 gaaacgatgagaaataagctcagagaagaaatcacgaaggccaatgccggttttaaattg 3448

                                                                        
Query: 265  gatttgtccttggagaaaggtcgtataagggaggaaagtagtcaccatgatatgcagatt 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3447 gatttgtccttggagaaaggtcgtataagggaggaaagtagtcaccatgatatgcagatt 3388

                                                                        
Query: 325  aaagaaatcgataccagaattgatcaagaagtgacgaacatgaagatgcaaattgattct 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3387 aaagaaatcgataccagaattgatcaagaagtgacgaacatgaagatgcaaattgattct 3328

                                                                        
Query: 385  gtgaagacgcaagtcatgcaatggctaataggtgtatgcactggtacatttgcacttgtc 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3327 gtgaagacgcaagtcatgcaatggctaataggtgtatgcactggtacatttgcacttgtc 3268

                                                                        
Query: 445  ttggcgtatgtcaggcttctaacttgaacctttgtccattgttttctttcagtggatgta 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3267 ttggcgtatgtcaggcttctaacttgaacctttgtccattgttttctttcagtggatgta 3208

                                                                        
Query: 505  tatacatgcgtatcataatacaaggctgcaatcataggtatgttgccatggaaagacgtg 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3207 tatacatgcgtatcataatacaaggctgcaatcataggtatgttgccatggaaagacgtg 3148

                                                                        
Query: 565  ttagctttcaaaagtaacttcggtatttaatttaactttaattatggggcaaagcccgac 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3147 ttagctttcaaaagtaacttcggtatttaatttaactttaattatggggcaaagcccgac 3088

                                                                        
Query: 625  aggaataggtacaaatgatctctaattgatacacgatactacaaagtcgtagaaaccatt 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3087 aggaataggtacaaatgatctctaattgatacacgatactacaaagtcgtagaaaccatt 3028

                                                                        
Query: 685  attcatagatcaaacaattcctttaagattctgacagtgtcagcaggagattctacagag 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3027 attcatagatcaaacaattcctttaagattctgacagtgtcagcaggagattctacagag 2968

                                                                        
Query: 745  tgaccgatagttctgtcgtcgacgtagatttcatagtcgttaccaccctttgtagtcttg 804
            ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||
Sbjct: 2967 tgaccgatagttctgtcgtcgacgtagatttcatagtcgttaccacccttgtaagtcttg 2908

                                                                        
Query: 805  tcaccgaagaagtggatttctttgaaaccgtcggctttgacgtgtcttaaac-gtaagtc 863
            ||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||
Sbjct: 2907 tcaccgaagaagtggatttctttgaaaccgtcggcttcgacgtgtctcaaacagtaagtc 2848

                                                           
Query: 864  taatcccaacgggttgggaaaacgtcaaatgaaatttgaccaccgat 910
            | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2847 ttatcccaaccggttgggaaaacgtcaaatgaaatttgaccaccgat 2801


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5947
Number of Sequences: 1807
Number of extensions: 5947
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)