BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZB01RM1.SCF screened BAC_end (886 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1021 1639 0.0 >3x_Contig1021 Length = 3847 Score = 1639 bits (827), Expect = 0.0 Identities = 835/838 (99%) Strand = Plus / Minus Query: 49 gaacaaaatactcgtaatgtaattactattgaatccactccaacttccataacccaagtt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1885 gaacaaaatactcgtaatgtaattactattgaatccactccaacttccataacccaagtt 1826 Query: 109 gacaaggagcaactcgaaggccaaccagcatcttccacttatcccagtaaagatgaggac 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1825 gacaaggagcaactcgaaggccaaccagcatcttccacttatcccagtaaagatgaggac 1766 Query: 169 aatacgaaatctccaattttccctaagatcaacaaatatgaaataccaaaaatcaacttt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1765 aatacgaaatctccaattttccctaagatcaacaaatatgaaataccaaaaatcaacttt 1706 Query: 229 actaaatctccttcttttgcagaattatttaaggaaatgcgcatggttttagacgagtct 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1705 actaaatctccttcttttgcagaattatttaaggaaatgcgcatggttttagacgagtct 1646 Query: 289 gatgaagtagtgaattggagaagactatccagtgaagtttcattaaatgaaaaatatgcc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1645 gatgaagtagtgaattggagaagactatccagtgaagtttcattaaatgaaaaatatgcc 1586 Query: 349 attcatataccgactgataagaacttaagatccaataagcgactatcagcagcagtagaa 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1585 attcatataccgactgataagaacttaagatccaataagcgactatcagcagcagtagaa 1526 Query: 409 gtccctgaacaagatgaactgtctttccacaaggatgatgttaaatctgatcaaagaaca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1525 gtccctgaacaagatgaactgtctttccacaaggatgatgttaaatctgatcaaagaaca 1466 Query: 469 ctagatactggagtaactctcactaaaagctcaaaattatctggtaattttaatgtaata 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1465 ctagatactggagtaactctcactaaaagctcaaaattatctggtaattttaatgtaata 1406 Query: 529 aaaacttctccagtcaaaattataactcgaaatgagttaactatgaaaagaacttcaaga 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1405 aaaacttctccagtcaaaattataactcgaaatgagttaactatgaaaagaacttcaaga 1346 Query: 589 tcctcgaacctgaacgatgatcctccaagtttctacacggaagatatgagcaaaaatgca 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1345 tcctcgaacctgaacgatgatcctccaagtttctacacggaagatatgagcaaaaatgca 1286 Query: 649 agacttgttgagctaacatttcactcgcaggaagatttaccggaaagtcctttttatact 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1285 agacttgttgagctaacatttcactcgcaggaagatttaccggaaagtcctttttatact 1226 Query: 709 ccacaaacagaagaaaccaaacctagtgaacacggccatgaagaanacaatgtggatcac 768 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1225 ccacaaacagaagaaaccaaacctagtgaacacggccatgaagaaacaaatgtggatcac 1166 Query: 769 ttagttccaccagaatcaaccataaaattaccgacggaaacgaccaatagccaagatgaa 828 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1165 ttagttccaccagaatcaaccataaaattaccgacggaaacgaccaatagccaagatgaa 1106 Query: 829 cctgcaccattattagatgatttagagttcagtttcttccacatgtcatttgacaata 886 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1105 cctgcaccattattagatgatttagagttcagtttcttccacatgtcatttgacaata 1048 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6741 Number of Sequences: 1807 Number of extensions: 6741 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 886 length of database: 10,358,551 effective HSP length: 16 effective length of query: 870 effective length of database: 10,329,639 effective search space: 8986785930 effective search space used: 8986785930 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)