BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZB02RM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1664 1661 0.0 >3x_Contig1664 Length = 15696 Score = 1661 bits (838), Expect = 0.0 Identities = 865/873 (99%), Gaps = 1/873 (0%) Strand = Plus / Plus Query: 54 aaatgatcacgaaaagaaaacctttatttccattttttacatttataaaggcactctctt 113 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 13806 aaatgatcacgaaaagaaaacctttatttccatttttcacatttataaaggcactctctt 13865 Query: 114 ctcaattggaatcacaattgcattttgacatatataaagacagcaccttttgttggagga 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13866 ctcaattggaatcacaattgcattttgacatatataaagacagcaccttttgttggagga 13925 Query: 174 ggcgagaaaaacagcgaaagacaaggtatattgttcggcgtaaagacttgagaaattgag 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13926 ggcgagaaaaacagcgaaagacaaggtatattgttcggcgtaaagacttgagaaattgag 13985 Query: 234 gaaacagggccataacctaaacaacacggatgatcatgttacaagttcctaatgctactt 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13986 gaaacagggccataacctaaacaacacggatgatcatgttacaagttcctaatgctactt 14045 Query: 294 gtgagtttggtttgaggccgtatatctcgcccgaagtaaatgcgttaaatccatgcttta 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14046 gtgagtttggtttgaggccgtatatctcgcccgaagtaaatgcgttaaatccatgcttta 14105 Query: 354 tctcctgggtttgcgtcatatttgtggctcacttcatcgccatcggaggcttccagtatg 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14106 tctcctgggtttgcgtcatatttgtggctcacttcatcgccatcggaggcttccagtatg 14165 Query: 414 tatcgttacgaaacaaggagacaggaccggctacttttgaaacaaaacggttctggactt 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14166 tatcgttacgaaacaaggagacaggaccggctacttttgaaacaaaacggttctggactt 14225 Query: 474 ttagaaatatgagcattttccatgttatacatatgatcaatgttcttttccaatgtgtac 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14226 ttagaaatatgagcattttccatgttatacatatgatcaatgttcttttccaatgtgtac 14285 Query: 534 tattgttaatccaattgagttgggttaaagatgaaccgacatggactaagtggagcattt 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14286 tattgttaatccaattgagttgggttaaagatgaaccgacatggactaagtggagcattt 14345 Query: 594 cattgaatttgttctatgttgctattgtttatttgaactctacatggttagcctattata 653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346 cattgaatttgttctatgttgctattgtttatttgaactctacatggttagcctattata 14405 Query: 654 agagttcttgcgctcagggccatggattattttattttatcatctacagtttcgtcgttg 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14406 agagttcttgcgctcagggccatggattattttattttatcatctacagtttcgtcgttg 14465 Query: 714 cctttgaaattggccaaagatactttcatgctggtacagaaaggtacaatgttatcaaaa 773 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 14466 cctttgaaattggccaaagatacttccatgctggtacagaaaggtacaatgttatcaaaa 14525 Query: 774 atggtgcctctgccatgatagtagatattttgttatggttcaatnctatgtctatccttt 833 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 14526 atggtgcctctgccatgatagtagatattttgttatggttcaattctatgtctatctttt 14585 Query: 834 gctatgataccttccttttncaagtgcttcccacaattgacaaattatttcgcagtaaac 893 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 14586 gctatgataccttcctttt-caagtgctccccacaattgacaaattatttcgcagtaaac 14644 Query: 894 aatatttatccttcagtttacgttctagctggg 926 |||||||||||| ||||| |||||||||||||| Sbjct: 14645 aatatttatcctccagttaacgttctagctggg 14677 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6995 Number of Sequences: 1807 Number of extensions: 6995 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)