BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZB07FM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1766 1296 0.0 >3x_Contig1766 Length = 23951 Score = 1296 bits (654), Expect = 0.0 Identities = 696/706 (98%), Gaps = 3/706 (0%) Strand = Plus / Plus Query: 86 tctacatcaaggtatatcttttggaatttttatatatctagtctcaaaccaaatccgctt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13781 tctacatcaaggtatatcttttggaatttttatatatctagtctcaaaccaaatccgctt 13840 Query: 146 tgagaatacctagacccgcatacgcttaggcatgtacatagatagaatatataagatcta 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13841 tgagaatacctagacccgcatacgcttaggcatgtacatagatagaatatataagatcta 13900 Query: 206 atttcaactgtgcttcgaagaacacgcaagttgaacttaacaaaccccggagaataggca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13901 atttcaactgtgcttcgaagaacacgcaagttgaacttaacaaaccccggagaataggca 13960 Query: 266 attcatatacttaaagattggaggcgcggcatttgtccctcaaatgcatggtaaccataa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13961 attcatatacttaaagattggaggcgcggcatttgtccctcaaatgcatggtaaccataa 14020 Query: 326 ccatcaatccattccaatccaagtggaatctgaattctagacggaggtctcgaagagacc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14021 ccatcaatccattccaatccaagtggaatctgaattctagacggaggtctcgaagagacc 14080 Query: 386 atcatcttcacccatacttactgatcgcacgatcgtttctatgaacattctttctcgatc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14081 atcatcttcacccatacttactgatcgcacgatcgtttctatgaacattctttctcgatc 14140 Query: 446 tcaattccgttacgatgatctggaaagaaaaagacggattttttcgaaaaaagacgtttt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14141 tcaattccgttacgatgatctggaaagaaaaagacggattttttcgaaaaaagacgtttt 14200 Query: 506 atttttattgtttgaattttccattttttttttttttttggcgaagcacctttccttttg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14201 atttttattgtttgaattttccattttttttttttttttggcgaagcacctttccttttg 14260 Query: 566 atctattttgcttgaatgattttcagatcaaatatagtataaataaaatgtgttacatgt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14261 atctattttgcttgaatgattttcagatcaaatatagtataaataaaatgtgttacatgt 14320 Query: 626 taacaagtacatgagatttaaactttgatctgtagtttggacgttgcctttttttttgct 685 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 14321 taacaagtacatgagatttaaactttgatctgtagtttgtacgttgcctttttttttgct 14380 Query: 686 ctgtataggttgactcacttgtgcagagggaatattagctggcacatttttttttcattt 745 |||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||| Sbjct: 14381 ctgtataggttgactcacttgtgcagagtgaatattagctggcaca-tctttttccattt 14439 Query: 746 gggtttagagaggaggaacaagttttaatttcgaactgatatattg 791 |||||||||||||||||| |||| | ||||||| ||||||||||| Sbjct: 14440 -ggtttagagaggaggaac-agttgttatttcgatctgatatattg 14483 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 18,198 Number of Sequences: 1807 Number of extensions: 18198 Number of successful extensions: 2562 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)