BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZC03RM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig373 1237 0.0 >3x_Contig373 Length = 2255 Score = 1237 bits (624), Expect = 0.0 Identities = 669/684 (97%) Strand = Plus / Plus Query: 49 gagtaaattgaaacccaatggagttatcttcttaagcactataaacagagacccaatctc 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1471 gagtaaattgaaacccaatggagttatcttcttaagcactataaacagagacccaatctc 1530 Query: 109 atggtttaccaccatattcatgggagagcagatattaaaagtagttccaaaaggaactca 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1531 atggtttaccaccatattcatgggagagcagatattaaaagtagttccaaaaggaactca 1590 Query: 169 tcacgttgaaaagtacatcaactcatcagagatcaaacaatggtttgaagataatgtaca 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1591 tcacgttgaaaagtacatcaactcatcagagatcaaacaatggtttgaagataatgtaca 1650 Query: 229 aggaagatatgaaattttagacactaaaggaaccatgtatctacctttgaccggttgggt 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1651 aggaagatatgaaattttagacactaaaggaaccatgtatctacctttgaccggttgggt 1710 Query: 289 ggaacacgactgcactaacatcggaaactactttatggcaatcaaaaaattgaactaatt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1711 ggaacacgactgcactaacatcggaaactactttatggcaatcaaaaaattgaactaatt 1770 Query: 349 attggcatcatatgtactgatacgaaacttatgacattttgaacgttaattctaagacat 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1771 attggcatcatatgtactgatacgaaacttatgacattttgaacgttaattctaagacat 1830 Query: 409 taatcggtgacgagtatgaaaagcttttatacccgttgagttagtgaattgttcctggac 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1831 taatcggtgacgagtatgaaaagcttttatacccgttgagttagtgaattgttcctggac 1890 Query: 469 aaacggagtatatacattgacgaattatatatacgcacgtaatatgatggttaattagct 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891 aaacggagtatatacattgacgaattatatatacgcacgtaatatgatggttaattagct 1950 Query: 529 gtttctaacgcaggcgggttttctaaaggttcatcatcaacaaattgcggcatagcgtta 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1951 gtttctaacgcaggcgggttttctaaaggttcatcatcaacaaattgcggcatagcgtta 2010 Query: 589 ttcaaatatgatggtaattctcccgtagtttctgaatcattcaagttcaattcttccaag 648 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2011 ttcaaatatgatggtaattctcccgtagtttctgaatcattcaagttcaattcttgcaag 2070 Query: 649 taatcttcttctccaagagcttctaactctgcatctaattcgctttcacttatgtcatca 708 |||||| || || |||||||| ||| | ||||| ||||| ||||| | ||||| || || Sbjct: 2071 taatctgctgctgcaagagctgctagcgctgcagctaatgcgcttgcgcttattgcagca 2130 Query: 709 atatcttgattttgcattgcgagc 732 ||||||| |||||||||||||||| Sbjct: 2131 atatctttattttgcattgcgagc 2154 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7575 Number of Sequences: 1807 Number of extensions: 7575 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)