BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZC06FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1093 1419 0.0 >3x_Contig1093 Length = 5169 Score = 1419 bits (716), Expect = 0.0 Identities = 831/859 (96%), Gaps = 8/859 (0%) Strand = Plus / Plus Query: 87 ttacaggatatgggtaacaatgaagaatctataacagttggtttcaacgaaatcgtcgat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1065 ttacaggatatgggtaacaatgaagaatctataacagttggtttcaacgaaatcgtcgat 1124 Query: 147 cttttaagccatgggaaagatgaatatatgctgttcgtatgcaataaagatttgccgtca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1125 cttttaagccatgggaaagatgaatatatgctgttcgtatgcaataaagatttgccgtca 1184 Query: 207 gttttaatttcgcagttacctatcttatgtgaaacctcggaccatacagtgacgcttgtc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1185 gttttaatttcgcagttacctatcttatgtgaaacctcggaccatacagtgacgcttgtc 1244 Query: 267 caattacctcgactctcgtcggccaagttcgatgacgcgttcagggatgtagtgcatgac 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1245 caattacctcgactctcgtcggccaagttcgatgacgcgttcagggatgtagtgcatgac 1304 Query: 327 ggtatgtgtcttgtgcgcacacatgctcattatcaggattttgcaaagatgatctctacc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1305 ggtatgtgtcttgtgcgcacacatgctcattatcaggattttgcaaagatgatctctacc 1364 Query: 387 aaagtggaaccattatccataccatggctgcattctgcacagttcaaaaaggctcccgtc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1365 aaagtggaaccattatccataccatggctgcattctgcacagttcaaaaaggctcccgtc 1424 Query: 447 aagctattggcaaccaccgcaccgatcataaagaaacaagggaaacaagggaaacaagtg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1425 aagctattggcaaccaccgcaccgatcataaagaaacaagggaaacaagggaaacaagtg 1484 Query: 507 ccatcctaaatggtaattgggctctccattttctgtccacgtgacctttataagcccatt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1485 ccatcctaaatggtaattgggctctccattttctgtccacgtgacctttataagcccatt 1544 Query: 567 tttcccacagatttcaccatctaaattttccagaaattttcattaaccgtcgagatgaca 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1545 tttcccacagatttcaccatctaaattttccagaaattttcattaaccgtcgagatgaca 1604 Query: 627 ttaaaacagagatgcatatatatatatgggaaccaatatcgttgacggtttttacagtta 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1605 ttaaaacagagatgcatatatatatatgggaaccaatatcgttgacggtttttacagtta 1664 Query: 687 cgtttatctcccggcaaccgtntactaacgcttctttaggc-ttgtggtcgcatactgag 745 ||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||| Sbjct: 1665 cgtttatctcccggcaaccgtttactaacgcttctttaagctttgtggtcgcatactgag 1724 Query: 746 tttagttg-attcagacc-agtgtgtgtctaa-tcttagtgtgt-gattgggtgcttgcg 801 |||||||| ||||||||| ||||||||||||| ||| ||||||| |||||| |||||||| Sbjct: 1725 tttagttgtattcagaccaagtgtgtgtctaattctcagtgtgtggattggttgcttgcg 1784 Query: 802 ctttctttggttttaaaggaaatcg-attgc-taaat-aggtttcgtcttatcagaacca 858 ||||||||| || | |||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 1785 ctttctttgcttctcaaggaaatcgaattgcttaaataaggtttcgtcttatcagaacca 1844 Query: 859 tgggaagtttaaacccttaaaactggccctgggtcgataaaaattccttgggattgacca 918 ||| | |||||||||| | ||||||| |||||||||||||||| | |||||| ||||| Sbjct: 1845 tggtagttttaaaccctaacaactggcactgggtcgataaaaatacactgggatggacca 1904 Query: 919 accattttttgaaacgtcg 937 || ||| |||||| ||||| Sbjct: 1905 acgattatttgaatcgtcg 1923 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8004 Number of Sequences: 1807 Number of extensions: 8004 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)