BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC50ZD07FM1.SCF screened BAC_end
         (894 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1502                                                        1415   0.0  

>3x_Contig1502 
          Length = 14970

 Score = 1415 bits (714), Expect = 0.0
 Identities = 791/812 (97%), Gaps = 4/812 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    gtgaaaaaccaggacaagtcaatgctcgagaagttaatcaaaccagctaaacaggctttg 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11663 gtgaaaaaccaggacaagtcaatgctcgagaagttaatcaaaccagctaaacaggctttg 11722

                                                                         
Query: 147   ttaatgactggtaaacaaggggaagatttagctgctttcaaattgccaaagggaccaagt 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11723 ttaatgactggtaaacaaggggaagatttagctgctttcaaattgccaaagggaccaagt 11782

                                                                         
Query: 207   tgtgttttaccaatatttttacatggtttaatgtatggttctggtgacgaacgtgaggct 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11783 tgtgttttaccaatatttttacatggtttaatgtatggttctggtgacgaacgtgaggct 11842

                                                                         
Query: 267   tcagcccttgccattgcggatattgtctccaagactcctgcagcaggcttgaaatcctat 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11843 tcagcccttgccattgcggatattgtctccaagactcctgcagcaggcttgaaatcctat 11902

                                                                         
Query: 327   gttacagttatcactggtcctttgattcgtgttgttggagaaagattcaatagtgacatc 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11903 gttacagttatcactggtcctttgattcgtgttgttggagaaagattcaatagtgacatc 11962

                                                                         
Query: 387   aaggcagctatcctttatgctttgaatatcctatttgcgaaaattcctcagttgttgaga 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11963 aaggcagctatcctttatgctttgaatatcctatttgcgaaaattcctcagttgttgaga 12022

                                                                         
Query: 447   cctttcattcctcagttgcaaagaacgtttgtcaaatctttgtccgatccaactaatgag 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12023 cctttcattcctcagttgcaaagaacgtttgtcaaatctttgtccgatccaactaatgag 12082

                                                                         
Query: 507   gtattacgtcttcgtgctgccaaggcattaggaaccttaattgaataccagcctagagtt 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12083 gtattacgtcttcgtgctgccaaggcattaggaaccttaattgaataccagcctagagtt 12142

                                                                         
Query: 567   gatccattggttgtcgaactggtaacaggtgctaagcaaagtgatgatgatggtgttaag 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12143 gatccattggttgtcgaactggtaacaggtgctaagcaaagtgatgatgatggtgttaag 12202

                                                                         
Query: 627   actgctatgttgaaggctttattggaagccgtatcaaaggcaggttccaaattgaaccaa 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12203 actgctatgttgaaggctttattggaagccgtatcaaaggcaggttccaaattgaaccaa 12262

                                                                         
Query: 687   acctcanaaa-caatatctntaaattgatcgaagaagaaatgttatctgcaaatgataag 745
             |||||| ||| ||||||||  || ||||||||||||||||||||||||||||||||||||
Sbjct: 12263 acctcaaaaaccaatatcttaaatttgatcgaagaagaaatgttatctgcaaatgataag 12322

                                                                         
Query: 746   ctcgcagtggcctacgcgaaa-taatccgatccttatcaagtatcttatcaacccgagaa 804
             ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||   |||
Sbjct: 12323 ctcgcagtggcctacgcgaaattaatcggatccttatcaagtatcttatcaaccgaggaa 12382

                                                                         
Query: 805   gctgc-acaatatttgaaagcaagg-ggtagaaagcttcttgactgaagatcctggttaa 862
             ||||| ||||||||  ||||||||| | ||||||||| ||||||||||||| ||||| ||
Sbjct: 12383 gctgcaacaatattgaaaagcaaggtgttagaaagctccttgactgaagattctggtaaa 12442

                                             
Query: 863   atcggatttttgaccctaaactcattcttgaa 894
              ||||  |||||||||||||||||||||||||
Sbjct: 12443 ttcggtattttgaccctaaactcattcttgaa 12474


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5802
Number of Sequences: 1807
Number of extensions: 5802
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)