BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZD07FM1.SCF screened BAC_end (894 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1502 1415 0.0 >3x_Contig1502 Length = 14970 Score = 1415 bits (714), Expect = 0.0 Identities = 791/812 (97%), Gaps = 4/812 (0%) Strand = Plus / Plus Query: 87 gtgaaaaaccaggacaagtcaatgctcgagaagttaatcaaaccagctaaacaggctttg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11663 gtgaaaaaccaggacaagtcaatgctcgagaagttaatcaaaccagctaaacaggctttg 11722 Query: 147 ttaatgactggtaaacaaggggaagatttagctgctttcaaattgccaaagggaccaagt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11723 ttaatgactggtaaacaaggggaagatttagctgctttcaaattgccaaagggaccaagt 11782 Query: 207 tgtgttttaccaatatttttacatggtttaatgtatggttctggtgacgaacgtgaggct 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11783 tgtgttttaccaatatttttacatggtttaatgtatggttctggtgacgaacgtgaggct 11842 Query: 267 tcagcccttgccattgcggatattgtctccaagactcctgcagcaggcttgaaatcctat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11843 tcagcccttgccattgcggatattgtctccaagactcctgcagcaggcttgaaatcctat 11902 Query: 327 gttacagttatcactggtcctttgattcgtgttgttggagaaagattcaatagtgacatc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11903 gttacagttatcactggtcctttgattcgtgttgttggagaaagattcaatagtgacatc 11962 Query: 387 aaggcagctatcctttatgctttgaatatcctatttgcgaaaattcctcagttgttgaga 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11963 aaggcagctatcctttatgctttgaatatcctatttgcgaaaattcctcagttgttgaga 12022 Query: 447 cctttcattcctcagttgcaaagaacgtttgtcaaatctttgtccgatccaactaatgag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12023 cctttcattcctcagttgcaaagaacgtttgtcaaatctttgtccgatccaactaatgag 12082 Query: 507 gtattacgtcttcgtgctgccaaggcattaggaaccttaattgaataccagcctagagtt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12083 gtattacgtcttcgtgctgccaaggcattaggaaccttaattgaataccagcctagagtt 12142 Query: 567 gatccattggttgtcgaactggtaacaggtgctaagcaaagtgatgatgatggtgttaag 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12143 gatccattggttgtcgaactggtaacaggtgctaagcaaagtgatgatgatggtgttaag 12202 Query: 627 actgctatgttgaaggctttattggaagccgtatcaaaggcaggttccaaattgaaccaa 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12203 actgctatgttgaaggctttattggaagccgtatcaaaggcaggttccaaattgaaccaa 12262 Query: 687 acctcanaaa-caatatctntaaattgatcgaagaagaaatgttatctgcaaatgataag 745 |||||| ||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 12263 acctcaaaaaccaatatcttaaatttgatcgaagaagaaatgttatctgcaaatgataag 12322 Query: 746 ctcgcagtggcctacgcgaaa-taatccgatccttatcaagtatcttatcaacccgagaa 804 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 12323 ctcgcagtggcctacgcgaaattaatcggatccttatcaagtatcttatcaaccgaggaa 12382 Query: 805 gctgc-acaatatttgaaagcaagg-ggtagaaagcttcttgactgaagatcctggttaa 862 ||||| |||||||| ||||||||| | ||||||||| ||||||||||||| ||||| || Sbjct: 12383 gctgcaacaatattgaaaagcaaggtgttagaaagctccttgactgaagattctggtaaa 12442 Query: 863 atcggatttttgaccctaaactcattcttgaa 894 |||| ||||||||||||||||||||||||| Sbjct: 12443 ttcggtattttgaccctaaactcattcttgaa 12474 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5802 Number of Sequences: 1807 Number of extensions: 5802 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 894 length of database: 10,358,551 effective HSP length: 16 effective length of query: 878 effective length of database: 10,329,639 effective search space: 9069423042 effective search space used: 9069423042 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)