BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZD10RM1.SCF screened BAC_end (901 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1520 1409 0.0 >3x_Contig1520 Length = 10750 Score = 1409 bits (711), Expect = 0.0 Identities = 773/789 (97%), Gaps = 5/789 (0%) Strand = Plus / Plus Query: 45 atatgtgtagttgaacagtatatacgttgctgtttttcatgcttttaggtactggccctt 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 985 atatgtgtagttgaacagtatatacgttgctgtttttcatgcttttaggtactggccctt 1044 Query: 105 gttaatcctgggacaatgaatatagtagatgtggcacgtctgtggcacgtctgggtcact 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1045 gttaatcctgggacaatgaatatagtagatgtggcacgtctgtggcacgtctgggtcact 1104 Query: 165 tagttattcactt--tcccggtgtatttttcaacacccataatacgaattaggttaaaat 222 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1105 tagttattcacatattcccggtgtatttttcaacacccataatacgaattaggttaaaat 1164 Query: 223 aggtgaaaaatgtcaactactgagaatttattcctagtcgttattgcacctagccgttcg 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1165 aggtgaaaaatgtcaactactgagaatttattcctagtcgttattgcacctagccgttcg 1224 Query: 283 aaaataaggtgtagtcatcaatatagtttgttgttcgttagcatcattgtatgtttttag 342 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1225 aaaataaggtgtagtcatcaatatagtttgttgttcgttagcatcattgaatgtttttcg 1284 Query: 343 tgttgttgtgtgtttcgcttagagttccgtgtagacgcaggatttttcagttctaaacgt 402 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1285 tgttgttgtgtgtttcgcttagtgttccgtgtagacgcaggatttttcagttctaaacgt 1344 Query: 403 caatcaagtatatgctggacatatataagattgaaactagcttgtgacagttaaaacggt 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1345 caatcaagtatatgctggacatatataagattgaaactagcttgtgacagttaaaacggt 1404 Query: 463 tcaacctttcaagatgatgttcgaaagtactggtaacgatcgtgtttcctatgcgcactt 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1405 tcaacctttcaagatgatgttcgaaagtactggtaacgatcgtgtttcctatgcgcactt 1464 Query: 523 gagcagacgtgatattatggcacgttatttcaatctttctgcaccagtcggccatgcagg 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1465 gagcagacgtgatattatggcacgttatttcaatctttctgcaccagtcggccatgcagg 1524 Query: 583 tgtgccgcttccgaagcatgtgattgcaaaacacgacgacagcaatgttgcagatgataa 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1525 tgtgccgcttccgaagcatgtgattgcaaaacacgacgacagcaatgttgcagatgataa 1584 Query: 643 ttacacctctgctgttaataataccacanagaatgatgaatttattcttagtgaaaagat 702 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1585 ttacacctctgctgttaataataccacaaagaatgatgaatttattcttagtgaaaagat 1644 Query: 703 attgattttacccattggaatttaggttaaaaataccaataatttgagccaatattgact 762 ||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| ||||| Sbjct: 1645 attgaatttacccattgaaattaaggttaaaattaccaataatttgagccaata-tgact 1703 Query: 763 tggtgaaattagcatcggtatcgaaatctttttatgacgccggcgaatgttttcttttta 822 ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct: 1704 tggtgaatttagcatcggtatcgaaatctttttatgacg-cggcg-atgttttctttgta 1761 Query: 823 cgaaaatat 831 ||||||||| Sbjct: 1762 cgaaaatat 1770 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6105 Number of Sequences: 1807 Number of extensions: 6105 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 901 length of database: 10,358,551 effective HSP length: 16 effective length of query: 885 effective length of database: 10,329,639 effective search space: 9141730515 effective search space used: 9141730515 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)