BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC50ZE01FM1.SCF screened BAC_end
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1773 1275 0.0
3x_Contig1790 1267 0.0
3x_Contig1124 1267 0.0
3x_Contig1805 1215 0.0
3x_Contig1213 1207 0.0
>3x_Contig1773
Length = 8694
Score = 1275 bits (643), Expect = 0.0
Identities = 783/812 (96%), Gaps = 14/812 (1%)
Strand = Plus / Plus
Query: 82 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7023 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 7082
Query: 142 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7083 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 7142
Query: 202 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7143 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 7202
Query: 262 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7203 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 7262
Query: 322 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7263 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 7322
Query: 382 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7323 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 7382
Query: 442 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7383 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 7442
Query: 502 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7443 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 7502
Query: 562 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7503 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 7562
Query: 622 tccgtattaggtataatgattntcnggnntgtttgggattttcacttgatcatagctctt 681
||||||||||||||||||||| || || | ||||||||||||||| |||||||||||||
Sbjct: 7563 tccgtattaggtataatgatt-tcgggtgt-tttgggattttcact-gatcatagctctt 7619
Query: 682 agactttaatattt-cgattgccttgagggttcaaca-ccagtatttctttggttatgat 739
|||||| ||||||| |||||||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 7620 agactt-aatattttcgattgccttgagg-ttcaacaaccagtatttctt-ggttatgat 7676
Query: 740 cccacaggcctttgtttgagcaattatcttcgcgtgataacatgtattcggaggaagtag 799
||||||| ||| ||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 7677 cccacag-cctctgtttgagcaattatcttcgcgtgataacatttat-cggaggaagtag 7734
Query: 800 atcttttgagaaaaaaggctggccccttacgctacctggatttcaccaaaccgtaaggga 859
||||||||||||||| | |||| ||| |||||||||| | ||| |||| ||||| ||
Sbjct: 7735 atcttttgagaaaaaggcttggcacct-acgctacctgatatacac-aaacagtaagcga 7792
Query: 860 tgatgacaccgtagccagttcctttaatgtgg 891
||||||||| ||||| ||||||||||||||||
Sbjct: 7793 tgatgacac-gtagc-agttcctttaatgtgg 7822
>3x_Contig1790
Length = 27369
Score = 1267 bits (639), Expect = 0.0
Identities = 782/812 (96%), Gaps = 14/812 (1%)
Strand = Plus / Plus
Query: 82 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3459 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 3518
Query: 142 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3519 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 3578
Query: 202 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3579 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 3638
Query: 262 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3639 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 3698
Query: 322 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3699 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 3758
Query: 382 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3759 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 3818
Query: 442 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3819 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 3878
Query: 502 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3879 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 3938
Query: 562 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3939 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 3998
Query: 622 tccgtattaggtataatgattntcnggnntgtttgggattttcacttgatcatagctctt 681
||||||||||||||||||||| | || | |||||||||||||| ||||||||||||||
Sbjct: 3999 tccgtattaggtataatgatt-tgtggtgt-tttgggattttcac-tgatcatagctctt 4055
Query: 682 agactttaata-tttcgattgccttgagggttcaac-accagtatttctttggttatgat 739
|||| |||||| ||||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct: 4056 agac-ttaatattttcgattgccttga-ggttcaacaaccagtatttc-ttggttatgat 4112
Query: 740 cccacaggcctttgtttgagcaattatcttcgcgtgataacatgtattcggaggaagtag 799
|||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 4113 cccaca-gcctctgtttgagcaattatcatcgcgtgataacatgta-tcggaggaagtag 4170
Query: 800 atcttttgagaaaaaaggctggccccttacgctacctggatttcaccaaaccgtaaggga 859
|||||||||| ||||||||| | | | |||||||||| ||| | ||||| ||||| ||
Sbjct: 4171 atcttttgag-aaaaaggcttggcacctacgctacct-gatatacacaaacagtaagcga 4228
Query: 860 tgatgacaccgtagccagttcctttaatgtgg 891
|||||||| ||||| |||||||||||||||||
Sbjct: 4229 tgatgaca-cgtag-cagttcctttaatgtgg 4258
>3x_Contig1124
Length = 2635
Score = 1267 bits (639), Expect = 0.0
Identities = 782/812 (96%), Gaps = 14/812 (1%)
Strand = Plus / Plus
Query: 82 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgaggaatgcggt 1699
Query: 142 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 tttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacattttc 1759
Query: 202 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1760 aatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtca 1819
Query: 262 aagataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccagtc 321
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1820 aatataacgaagctccggtatgtggctagtcatacctgtgcagaaccatgcagaccagtc 1879
Query: 322 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1880 cagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatctc 1939
Query: 382 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1940 attccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaagaag 1999
Query: 442 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2000 ctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctctgg 2059
Query: 502 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2060 aggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataattca 2119
Query: 562 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2120 acttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttcat 2179
Query: 622 tccgtattaggtataatgattntcnggnntgtttgggattttcacttgatcatagctctt 681
||||||||||||||||||||| || || | ||||||||||||||| |||||||||||||
Sbjct: 2180 tccgtattaggtataatgatt-tcgggtgt-tttgggattttcact-gatcatagctctt 2236
Query: 682 agactttaatattt-cgattgccttgagggttcaaca-ccagtatttctttggttatgat 739
|||||| ||||||| |||||||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 2237 agactt-aatattttcgattgccttgagg-ttcaacaaccagtatttctt-ggttatgat 2293
Query: 740 cccacaggcctttgtttgagcaattatcttcgcgtgataacatgtattcggaggaagtag 799
||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2294 cccacag-cctctgtttgagcaattatcttcgcgtgataacatgtat-cggaggaagtag 2351
Query: 800 atcttttgagaaaaaaggctggccccttacgctacctggatttcaccaaaccgtaaggga 859
||||||||||||||| | |||| ||| |||||||||| | ||| |||| ||||| ||
Sbjct: 2352 atcttttgagaaaaaggcttggcacct-acgctacctgatatacac-aaacagtaagcga 2409
Query: 860 tgatgacaccgtagccagttcctttaatgtgg 891
||||||||| ||||| ||||||||||||||||
Sbjct: 2410 tgatgacac-gtagc-agttcctttaatgtgg 2439
>3x_Contig1805
Length = 19369
Score = 1215 bits (613), Expect = 0.0
Identities = 779/814 (95%), Gaps = 16/814 (1%)
Strand = Plus / Minus
Query: 82 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgagg-aatgcgg 140
||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||
Sbjct: 18426 caagttgtattatcttggcatttctatatctacataccttttacatgtgagggaatgcgg 18367
Query: 141 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18366 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 18307
Query: 201 caatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18306 caatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 18247
Query: 261 aaaga-taacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 319
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18246 aaagaataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 18187
Query: 320 tccagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatc 379
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 18186 tccagcgtttattttcgtttcctttttcccttttttgcaacttttgacgttgcctgtatc 18127
Query: 380 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18126 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 18067
Query: 440 agctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctct 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18066 agctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctct 18007
Query: 500 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18006 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 17947
Query: 560 caacttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttc 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17946 caacttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttc 17887
Query: 620 attccgtattaggtataatgattntcnggnntgtttgggattttcacttgatcatagctc 679
||||||||||||||||||||||| | || | |||||||||||||| ||||||||||||
Sbjct: 17886 attccgtattaggtataatgatt-tggggtgt-tttgggattttcac-tgatcatagctc 17830
Query: 680 ttagactttaata-tttcgattgccttgagggttcaac-accagtatttctttggttatg 737
|||||| |||||| ||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 17829 ttagac-ttaatattttcgattgccttga-ggttcaacaaccagtatttc-ttggttatg 17773
Query: 738 atcccacaggcctttgtttgagcaattatcttcgcgtgataacatgtattcggaggaagt 797
|||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 17772 atcccaca-gcctctgtttgagcaattatcatcgcgtgataacatgta-tcggaggaagt 17715
Query: 798 agatcttttgagaaaaaaggctggccccttacgctacctggatttcaccaaaccgtaagg 857
|||||||||||| ||||||||| | | | |||||||||| ||| | ||||| |||||
Sbjct: 17714 agatcttttgag-aaaaaggcttggcacctacgctacct-gatatacacaaacagtaagc 17657
Query: 858 gatgatgacaccgtagccagttcctttaatgtgg 891
|||||||||| ||||| |||||||||||||||||
Sbjct: 17656 gatgatgaca-cgtag-cagttcctttaatgtgg 17625
>3x_Contig1213
Length = 3226
Score = 1207 bits (609), Expect = 0.0
Identities = 778/814 (95%), Gaps = 16/814 (1%)
Strand = Plus / Minus
Query: 82 caagttgtattatcttggcatttttatatctacgtaccttttacatgtgagg-aatgcgg 140
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 1677 caagttgtattatcttggcatttctatatctacgtaccttttacatgtgagggaatgcgg 1618
Query: 141 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1617 ttttatcttgtagatgtctgtttcacttacgttgctgcatatattcgttccttacatttt 1558
Query: 201 caatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1557 caatgcagtgcaaaaaatggctaacaataaaagcagaagatgaagaaaattgaaaaagtc 1498
Query: 261 aaaga-taacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 319
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1497 aaagaataacgaagctccggtatgtggctagtcagacctgtgcagaaccatgcagaccag 1438
Query: 320 tccagcgtttattttcgtttcctttttcccttttttgcaaattttgacgttgcctgtatc 379
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1437 tccagcgtttattttcgtttcctttttcccttttttgcaacttttgatgttgcctgtatc 1378
Query: 380 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 tcattccttcatgagctagcaatagcaggtaataacgtagaatgttgaagtgaaggaaga 1318
Query: 440 agctgcggggaaagtgtgttcagcttttagacttaattttcatggtactacgtgatctct 499
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1317 agctgcggggaaagtgtgttcagcttttagacttaattttcacggtactacgtgatctct 1258
Query: 500 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 ggaggaaataatcctcaagcttggtttttaggcactgcgaacttgtcgctgagcataatt 1198
Query: 560 caacttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttc 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 caacttaatccatgttttctggagcctttaacaataaatcctgattatgcactgcttttc 1138
Query: 620 attccgtattaggtataatgattntcnggnntgtttgggattttcacttgatcatagctc 679
||||||||||||||||||||||| | || | |||||||||||||| ||||||||||||
Sbjct: 1137 attccgtattaggtataatgatt-tggggtgt-tttgggattttcac-tgatcatagctc 1081
Query: 680 ttagactttaata-tttcgattgccttgagggttcaac-accagtatttctttggttatg 737
|||||| |||||| ||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 1080 ttagac-ttaatattttcgattgccttga-ggttcaacaaccagtatttc-ttggttatg 1024
Query: 738 atcccacaggcctttgtttgagcaattatcttcgcgtgataacatgtattcggaggaagt 797
|||||||| |||| ||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 1023 atcccaca-gcctctgtttgagcaattatcttcgcgtgataacattta-tcggaggaagt 966
Query: 798 agatcttttgagaaaaaaggctggccccttacgctacctggatttcaccaaaccgtaagg 857
|||||||||||| ||||||||| | | | |||||||||| ||| | ||||| |||||
Sbjct: 965 agatcttttgag-aaaaaggcttggcacctacgctacct-gatatacacaaacagtaagc 908
Query: 858 gatgatgacaccgtagccagttcctttaatgtgg 891
|||||||||| ||||| |||||||||||||||||
Sbjct: 907 gatgatgaca-cgtag-cagttcctttaatgtgg 876
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6360
Number of Sequences: 1807
Number of extensions: 6360
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 5
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)