BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZE02FM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1786 1582 0.0 >3x_Contig1786 Length = 33838 Score = 1582 bits (798), Expect = 0.0 Identities = 823/830 (99%), Gaps = 1/830 (0%) Strand = Plus / Minus Query: 88 ctttgcttgttatccttcggatgaggtgttcgcgtctgcgaactgccattagcctgataa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28719 ctttgcttgttatccttcggatgaggtgttcgcgtctgcgaactgccattagcctgataa 28660 Query: 148 ttgttcggattatgcaagtgatttgtatgctttaaagtctgaagtcctggtggaagatcg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28659 ttgttcggattatgcaagtgatttgtatgctttaaagtctgaagtcctggtggaagatcg 28600 Query: 208 ccggaaatttgtggagaaacccgggtatcagtattgtggctgccttcactgccactatca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28599 ccggaaatttgtggagaaacccgggtatcagtattgtggctgccttcactgccactatca 28540 Query: 268 tttccgttgcttccgttaccgttagcattgcggaagaatcgtccaagtgctagccttgat 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28539 tttccgttgcttccgttaccgttagcattgcggaagaatcgtccaagtgctagccttgat 28480 Query: 328 ttattcttgatggagctcttggaaaagaacgtacctgcagaacttgcagattttacggat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28479 ttattcttgatggagctcttggaaaagaacgtacctgcagaacttgcagattttacggat 28420 Query: 388 tgaatctcgtgactggactccgcactcaactgattgtcaggcatcctcgttacacactac 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28419 tgaatctcgtgactggactccgcactcaactgattgtcaggcatcctcgttacacactac 28360 Query: 448 gtccccttggtagactcggtctctatcagtgcattactgtgactaattctgctaatgtgt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28359 gtccccttggtagactcggtctctatcagtgcattactgtgactaattctgctaatgtgt 28300 Query: 508 attaataacttggctcgatttaactttaattgtctttatattgtttatttattagaaaat 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28299 attaataacttggctcgatttaactttaattgtctttatattgtttatttattagaaaat 28240 Query: 568 ccttatttaaccattttgaacgaaattgtcataccgtggaagaaagagagtggaaatgga 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28239 ccttatttaaccattttgaacgaaattgtcataccgtggaagaaagagagtggaaatgga 28180 Query: 628 attaagacggaaacacaaaatatacgagagaatgagcacaagaaagcatgtgcgatgatg 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28179 attaagacggaaacacaaaatatacgagagaatgagcacaagaaagcatgtgcgatgatg 28120 Query: 688 gaacggatctatgcaacgatacagctgaagaatatgagtgctaatcggatgtaattagta 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28119 gaacggatctatgcaacgatacagctgaagaatatgagtgctaatcggatgtaattagta 28060 Query: 748 tagctttgagcttaaaactgaaagatatgcatatcatagtctatctaatggttgtcgaaa 807 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 28059 tagctttgagcttaaaactgaaagatatgcatatcatagtctatctaatgtttgtcgaaa 28000 Query: 808 gactatatgtgaactttttagcaactccgaagtttacttatccgaatgtcttcatgcttg 867 |||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 27999 gactatatgtgaac-ttttagcaactccgaagttaacttatcgaaatgtcttcatgcttg 27941 Query: 868 tgagtgcgcatttatagatgtatgtaggtgttgtgatgaaggaagttgtg 917 ||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 27940 tgagtgcgcatttatagatgtatgtaggtgttgtgatgaggaaagttgtg 27891 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5039 Number of Sequences: 1807 Number of extensions: 5039 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)