BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZE07RM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1590 716 0.0 >3x_Contig1590 Length = 13653 Score = 716 bits (361), Expect = 0.0 Identities = 368/369 (99%), Gaps = 1/369 (0%) Strand = Plus / Plus Query: 47 ggtttaaaattgtgcacccaataacaattgatgccacggtgattaaagtgatataatcag 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13286 ggtttaaaattgtgcacccaataacaattgatgccacggtgattaaagtgatataatcag 13345 Query: 107 ttggtttaaacttgtcaaagtttttgaaacccaagaatgttgtgactaatggcttggaat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13346 ttggtttaaacttgtcaaagtttttgaaacccaagaatgttgtgactaatggcttggaat 13405 Query: 167 agttatctaattgtttgaccatcttatcatcaattgattcctcttcgtcggatgaatcag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13406 agttatctaattgtttgaccatcttatcatcaattgattcctcttcgtcggatgaatcag 13465 Query: 227 atccatagatgcgttcgatatgaggagtttccacatacttcaaaaacaagaattgcaaac 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13466 atccatagatgcgttcgatatgaggagtttccacatacttcaaaaacaagaattgcaaac 13525 Query: 287 agtgaccaagaatggaaacgaaaagaacatgatgatcgccggagattaaactcaacccat 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13526 agtgaccaagaatggaaacgaaaagaacatgatgatcgccggagattaaactcaacccat 13585 Query: 347 agtagccaatgtaaccgatagaatacatgggatgtgggaaaacgttgaaaacaccatcaa 406 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 13586 agtagccaatgtaaccgatagaatacatgggatgtgggaaaacgtt-aaaacaccatcaa 13644 Query: 407 agacaaggt 415 ||||||||| Sbjct: 13645 agacaaggt 13653 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8006 Number of Sequences: 1807 Number of extensions: 8006 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)