BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC50ZE10RM1.SCF screened BAC_end
         (930 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1673                                                        1526   0.0  

>3x_Contig1673 
          Length = 13723

 Score = 1526 bits (770), Expect = 0.0
 Identities = 812/821 (98%), Gaps = 4/821 (0%)
 Strand = Plus / Minus

                                                                        
Query: 47   ataaattcagtgatgttttccgtcttttaagtgcagtatctgcgttggatttcattccaa 106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5507 ataaattcagtgatgttttccgtcttttaagtgcagtatctgcgttggatttcattccaa 5448

                                                                        
Query: 107  aggatcagcacagttctttcatggaaaaaaatttcttaagggcaaaaaccgtagaggaga 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5447 aggatcagcacagttctttcatggaaaaaaatttcttaagggcaaaaaccgtagaggaga 5388

                                                                        
Query: 167  ttatgaagttgagaaagcaggtgatgttcatcatcaggtcagttacttcgagagaaaatg 226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5387 ttatgaagttgagaaagcaggtgatgttcatcatcaggtcagttacttcgagagaaaatg 5328

                                                                        
Query: 227  tagctgtaaatgttaaagacgaagacttgaagagctcgatccccaccgatgttcaaatca 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5327 tagctgtaaatgttaaagacgaagacttgaagagctcgatccccaccgatgttcaaatca 5268

                                                                        
Query: 287  aattactcaagcaaatgatcacagcaggatttatcgaccaggtggccgttcgcgcagacc 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5267 aattactcaagcaaatgatcacagcaggatttatcgaccaggtggccgttcgcgcagacc 5208

                                                                        
Query: 347  agttattcccggaagacgttactatcaacaaaaccaacattttcaatatcccttatgttc 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5207 agttattcccggaagacgttactatcaacaaaaccaacattttcaatatcccttatgttc 5148

                                                                        
Query: 407  cagtccttgctgagaaaacatcttctttggatgatatctttgtttatattcatccaacct 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5147 cagtccttgctgagaaaacatcttctttggatgatatctttgtttatattcatccaacct 5088

                                                                        
Query: 467  caattctcaacaattctggcgagcaacctccgaaatacttggttttccaatcactacatg 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5087 caattctcaacaattctggcgagcaacctccgaaatacttggttttccaatcactacatg 5028

                                                                        
Query: 527  tcaataaaaataatgaaaaggcgaaaacaaggatgaagtctctttgtgacattaaaagca 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5027 tcaataaaaataatgaaaaggcgaaaacaaggatgaagtctctttgtgacattaaaagca 4968

                                                                        
Query: 587  cgccattggctaacgttgcaagaaagggctcgttactcacttacggaaaaccaatcactg 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4967 cgccattggctaacgttgcaagaaagggctcgttactcacttacggaaaaccaatcactg 4908

                                                                        
Query: 647  gacaaggtttgaaacctattgatttatcgccaacagaaagattctgctatgttgntccta 706
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4907 gacaaggtttgaaacctattgatttatcgccaacagaaagattctgctatgttgttccta 4848

                                                                        
Query: 707  gatttggatcttgcaatgatagcgacatcaagattggttgggaacttcatcctatccctg 766
            ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 4847 gatttggatcttgcaatgatagcgacatcaagattggttgggaactcaatcctatccctg 4788

                                                                        
Query: 767  ttcatcaaagagaaagagaaa-gtgtatgggaccgtcaagaaattccttactcccaaagc 825
            |||||| |||||||||||||| |||||| |||| |||||||||||||||||||| |||||
Sbjct: 4787 ttcatc-aagagaaagagaaaggtgtat-ggacggtcaagaaattccttactccaaaagc 4730

                                                     
Query: 826  atttaaaaactatcaagccttcgaaaagaccctagaactac 866
            ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4729 atttaaaaactatcaag-cttcgaaaagaccctagaactac 4690


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7575
Number of Sequences: 1807
Number of extensions: 7575
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)