BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZE10RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1673 1526 0.0 >3x_Contig1673 Length = 13723 Score = 1526 bits (770), Expect = 0.0 Identities = 812/821 (98%), Gaps = 4/821 (0%) Strand = Plus / Minus Query: 47 ataaattcagtgatgttttccgtcttttaagtgcagtatctgcgttggatttcattccaa 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5507 ataaattcagtgatgttttccgtcttttaagtgcagtatctgcgttggatttcattccaa 5448 Query: 107 aggatcagcacagttctttcatggaaaaaaatttcttaagggcaaaaaccgtagaggaga 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5447 aggatcagcacagttctttcatggaaaaaaatttcttaagggcaaaaaccgtagaggaga 5388 Query: 167 ttatgaagttgagaaagcaggtgatgttcatcatcaggtcagttacttcgagagaaaatg 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5387 ttatgaagttgagaaagcaggtgatgttcatcatcaggtcagttacttcgagagaaaatg 5328 Query: 227 tagctgtaaatgttaaagacgaagacttgaagagctcgatccccaccgatgttcaaatca 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5327 tagctgtaaatgttaaagacgaagacttgaagagctcgatccccaccgatgttcaaatca 5268 Query: 287 aattactcaagcaaatgatcacagcaggatttatcgaccaggtggccgttcgcgcagacc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5267 aattactcaagcaaatgatcacagcaggatttatcgaccaggtggccgttcgcgcagacc 5208 Query: 347 agttattcccggaagacgttactatcaacaaaaccaacattttcaatatcccttatgttc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5207 agttattcccggaagacgttactatcaacaaaaccaacattttcaatatcccttatgttc 5148 Query: 407 cagtccttgctgagaaaacatcttctttggatgatatctttgtttatattcatccaacct 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5147 cagtccttgctgagaaaacatcttctttggatgatatctttgtttatattcatccaacct 5088 Query: 467 caattctcaacaattctggcgagcaacctccgaaatacttggttttccaatcactacatg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5087 caattctcaacaattctggcgagcaacctccgaaatacttggttttccaatcactacatg 5028 Query: 527 tcaataaaaataatgaaaaggcgaaaacaaggatgaagtctctttgtgacattaaaagca 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5027 tcaataaaaataatgaaaaggcgaaaacaaggatgaagtctctttgtgacattaaaagca 4968 Query: 587 cgccattggctaacgttgcaagaaagggctcgttactcacttacggaaaaccaatcactg 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4967 cgccattggctaacgttgcaagaaagggctcgttactcacttacggaaaaccaatcactg 4908 Query: 647 gacaaggtttgaaacctattgatttatcgccaacagaaagattctgctatgttgntccta 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 4907 gacaaggtttgaaacctattgatttatcgccaacagaaagattctgctatgttgttccta 4848 Query: 707 gatttggatcttgcaatgatagcgacatcaagattggttgggaacttcatcctatccctg 766 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4847 gatttggatcttgcaatgatagcgacatcaagattggttgggaactcaatcctatccctg 4788 Query: 767 ttcatcaaagagaaagagaaa-gtgtatgggaccgtcaagaaattccttactcccaaagc 825 |||||| |||||||||||||| |||||| |||| |||||||||||||||||||| ||||| Sbjct: 4787 ttcatc-aagagaaagagaaaggtgtat-ggacggtcaagaaattccttactccaaaagc 4730 Query: 826 atttaaaaactatcaagccttcgaaaagaccctagaactac 866 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4729 atttaaaaactatcaag-cttcgaaaagaccctagaactac 4690 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7575 Number of Sequences: 1807 Number of extensions: 7575 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)