BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZF02RM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1174 1691 0.0 >3x_Contig1174 Length = 6106 Score = 1691 bits (853), Expect = 0.0 Identities = 861/864 (99%) Strand = Plus / Plus Query: 47 tgaaaagaataaaagaaagcgctgctagcaaacgcacaagggaagatgattgttctgacg 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1630 tgaaaagaataaaagaaagcgctgctagcaaacgcacaagggaagatgattgttctgacg 1689 Query: 107 atttggagaaacaatcaattatatgggaatccgaacaggagcctcagagcaagaagacct 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1690 atttggagaaacaatcaattatatgggaatccgaacaggagcctcagagcaagaagacct 1749 Query: 167 attctccattagatgttgaaacgtttagtcaaaaaatgaacttggattcagcaagacctg 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1750 attctccattagatgttgaaacgtttagtcaaaaaatgaacttggattcagcaagacctg 1809 Query: 227 actcgaagactttatcgttcatccagactcttcaaaagcttttagagtctgagcaacaat 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1810 actcgaagactttatcgttcatccagactcttcaaaagcttttagagtctgagcaacaat 1869 Query: 287 acttcgaaatgttgagtctatgtttatcaacttacaaggaagaagcatgccacaacaaga 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1870 acttcgaaatgttgagtctatgtttatcaacttacaaggaagaagcatgccacaacaaga 1929 Query: 347 aatttaggaacaaattgttgaatagagcttcaaacgatgagctattgttgtttgggaatt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1930 aatttaggaacaaattgttgaatagagcttcaaacgatgagctattgttgtttgggaatt 1989 Query: 407 tagatacgatggcagagttaagtaaattattctgcaaaaatttatcagaatgcttgaaag 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1990 tagatacgatggcagagttaagtaaattattctgcaaaaatttatcagaatgcttgaaag 2049 Query: 467 tgacagatgctggtactcagagcaggatttggaaggaaattaaagggagtgacaagttat 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2050 tgacagatgctggtactcagagcaggatttggaaggaaattaaagggagtgacaagttat 2109 Query: 527 gtcaaattatacttgatactgatttctctacgttgataaaatctcatttacatagaatca 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2110 gtcaaattatacttgatactgatttctctacgttgataaaatctcatttacatagaatca 2169 Query: 587 agtccccatatcatagctactgcatctgtcatgaggaaaggaaacgatttctagactcga 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2170 agtccccatatcatagctactgcatctgtcatgaggaaaggaaacgatttctagactcga 2229 Query: 647 tcaaattgcaaaacacggaaacgttttacaagtggtacgagttatgcttaaaaaaatcac 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2230 tcaaattgcaaaacacggaaacgttttacaagtggtacgagttatgcttaaaaaaatcac 2289 Query: 707 aatttgagaagttagaagacctcttggagttgccattggagaggctaggccaatgggggt 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2290 aatttgagaagttagaagacctcttggagttgccattggagaggctaggccaatgggggt 2349 Query: 767 cattgntcgagaacttatgtttatttggtgacaatttgctatcaccagaacggtctgttc 826 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2350 cattgttcgagaacttatgtttatttggtgacaatttgctatcaccagaacggtctgttc 2409 Query: 827 agatgaatgcgatatcaaaaagatacattagttatctaagggatctaaacgatgaactaa 886 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2410 agatgaatgcgatatcaaaagaatacattagttatctaagggatctaaacgatgaactaa 2469 Query: 887 ataattccggacgtgcaaaggaaa 910 |||||||||||||||||||||||| Sbjct: 2470 ataattccggacgtgcaaaggaaa 2493 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6763 Number of Sequences: 1807 Number of extensions: 6763 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)