BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZF09RM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig801 1417 0.0 >3x_Contig801 Length = 2608 Score = 1417 bits (715), Expect = 0.0 Identities = 798/815 (97%), Gaps = 8/815 (0%) Strand = Plus / Plus Query: 47 cacgtcgagtgatttgatacctgctgtgtgtaccaggattttttcggaccagttttgtaa 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 cacgtcgagtgatttgatacctgctgtgtgtaccaggattttttcggaccagttttgtaa 183 Query: 107 ttgttttgtttccaatttgaggcccctgtcaaaaagctcattattccttatctcgaacgg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 ttgttttgtttccaatttgaggcccctgtcaaaaagctcattattccttatctcgaacgg 243 Query: 167 aacggaattagtgatgtcccatgtaattaaatgaccatctgttggtgcaatcagaagttt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 aacggaattagtgatgtcccatgtaattaaatgaccatctgttggtgcaatcagaagttt 303 Query: 227 caagcaattctgtaacggaatgaaagcaacgttccagatacaacaggtttcatatcttcc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 caagcaattctgtaacggaatgaaagcaacgttccagatacaacaggtttcatatcttcc 363 Query: 287 atctatgatcaaggtgaaagaattttgctcgttaaagtagtgccatactttcactgaact 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 atctatgatcaaggtgaaagaattttgctcgttaaagtagtgccatactttcactgaact 423 Query: 347 gtcactgtatactgtagccattatgaaatcgcaagtgtcaccattcaaaaatagcacatc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gtcactgtatactgtagccattatgaaatcgcaagtgtcaccattcaaaaatagcacatc 483 Query: 407 gaaatccattatccgaaggtctggattgttcatagaagggattagtttctgtttcaaatt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 gaaatccattatccgaaggtctggattgttcatagaagggattagtttctgtttcaaatt 543 Query: 467 cacatatggatgagagaattgatcattcaattcccataagaatagctcttcccttgcact 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 cacatatggatgagagaattgatcattcaattcccataagaatagctcttcccttgcact 603 Query: 527 acacgtaatgaaaaaattgtcacagatgaatttgcatcgttgtaagccggacacatgaga 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 acacgtaatgaaaaaattgtcacagatgaatttgcatcgttgtaagccggacacatgaga 663 Query: 587 tttcagagtccagaaattttgaatagctccggtttctgaattgatagaagacaatttaac 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 tttcagagtccagaaattttgaatagctccggtttctgaattgatagaagacaatttaac 723 Query: 647 tgttgtgtcttctgatccagtaataaatagtaggttttcctttacatagtttgagcgttt 706 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 724 tgttgtgtcttctgatccagtaataaatagtaggttttccttacaatagtttgagcgttt 783 Query: 707 tcggaatgagatatccctntatttccctttcatgagttccatttttttaaagctccctgg 766 |||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 784 tcggaatgagatatccct-tatttcccttccatgagttcca-ttttttaaagct-cctgg 840 Query: 767 gtatttgccctttgggtatcttaataatgttggagggtaggattttttcacaaaacaaag 826 ||||||| ||||||||||||||| ||||||| ||||||| || |||||||||||||| || Sbjct: 841 gtatttg-cctttgggtatcttagtaatgtt-gagggta-gaatttttcacaaaacagag 897 Query: 827 cacctgtttgttgctttttgagatcccaaaagctt 861 |||||| ||||||| | ||||||||| |||||||| Sbjct: 898 cacctg-ttgttgc-tcttgagatccaaaaagctt 930 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6994 Number of Sequences: 1807 Number of extensions: 6994 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)