BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC50ZF09RM1.SCF screened BAC_end
         (956 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig801                                                         1417   0.0  

>3x_Contig801 
          Length = 2608

 Score = 1417 bits (715), Expect = 0.0
 Identities = 798/815 (97%), Gaps = 8/815 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  cacgtcgagtgatttgatacctgctgtgtgtaccaggattttttcggaccagttttgtaa 106
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 cacgtcgagtgatttgatacctgctgtgtgtaccaggattttttcggaccagttttgtaa 183

                                                                       
Query: 107 ttgttttgtttccaatttgaggcccctgtcaaaaagctcattattccttatctcgaacgg 166
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttgttttgtttccaatttgaggcccctgtcaaaaagctcattattccttatctcgaacgg 243

                                                                       
Query: 167 aacggaattagtgatgtcccatgtaattaaatgaccatctgttggtgcaatcagaagttt 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aacggaattagtgatgtcccatgtaattaaatgaccatctgttggtgcaatcagaagttt 303

                                                                       
Query: 227 caagcaattctgtaacggaatgaaagcaacgttccagatacaacaggtttcatatcttcc 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 caagcaattctgtaacggaatgaaagcaacgttccagatacaacaggtttcatatcttcc 363

                                                                       
Query: 287 atctatgatcaaggtgaaagaattttgctcgttaaagtagtgccatactttcactgaact 346
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atctatgatcaaggtgaaagaattttgctcgttaaagtagtgccatactttcactgaact 423

                                                                       
Query: 347 gtcactgtatactgtagccattatgaaatcgcaagtgtcaccattcaaaaatagcacatc 406
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gtcactgtatactgtagccattatgaaatcgcaagtgtcaccattcaaaaatagcacatc 483

                                                                       
Query: 407 gaaatccattatccgaaggtctggattgttcatagaagggattagtttctgtttcaaatt 466
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaaatccattatccgaaggtctggattgttcatagaagggattagtttctgtttcaaatt 543

                                                                       
Query: 467 cacatatggatgagagaattgatcattcaattcccataagaatagctcttcccttgcact 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cacatatggatgagagaattgatcattcaattcccataagaatagctcttcccttgcact 603

                                                                       
Query: 527 acacgtaatgaaaaaattgtcacagatgaatttgcatcgttgtaagccggacacatgaga 586
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 acacgtaatgaaaaaattgtcacagatgaatttgcatcgttgtaagccggacacatgaga 663

                                                                       
Query: 587 tttcagagtccagaaattttgaatagctccggtttctgaattgatagaagacaatttaac 646
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tttcagagtccagaaattttgaatagctccggtttctgaattgatagaagacaatttaac 723

                                                                       
Query: 647 tgttgtgtcttctgatccagtaataaatagtaggttttcctttacatagtttgagcgttt 706
           ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 724 tgttgtgtcttctgatccagtaataaatagtaggttttccttacaatagtttgagcgttt 783

                                                                       
Query: 707 tcggaatgagatatccctntatttccctttcatgagttccatttttttaaagctccctgg 766
           |||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||
Sbjct: 784 tcggaatgagatatccct-tatttcccttccatgagttcca-ttttttaaagct-cctgg 840

                                                                       
Query: 767 gtatttgccctttgggtatcttaataatgttggagggtaggattttttcacaaaacaaag 826
           ||||||| ||||||||||||||| ||||||| ||||||| || |||||||||||||| ||
Sbjct: 841 gtatttg-cctttgggtatcttagtaatgtt-gagggta-gaatttttcacaaaacagag 897

                                              
Query: 827 cacctgtttgttgctttttgagatcccaaaagctt 861
           |||||| ||||||| | ||||||||| ||||||||
Sbjct: 898 cacctg-ttgttgc-tcttgagatccaaaaagctt 930


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6994
Number of Sequences: 1807
Number of extensions: 6994
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)