BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZF12FM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1724 1404 0.0 >3x_Contig1724 Length = 20938 Score = 1404 bits (708), Expect = 0.0 Identities = 772/788 (97%), Gaps = 4/788 (0%) Strand = Plus / Minus Query: 86 cgagatgctttagtacagaagaaacaacctcgaagccaagtggaatagtttagagcaaga 145 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 11077 cgagatgctttagtacagaagaaacaac-tcgaagccaagtggaatagtttagagcaaga 11019 Query: 146 ggtatacgataaagaaacagagtatctatcacagaaaccatcttccagaatggggaacat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11018 ggtatacgataaagaaacagagtatctatcacagaaaccatcttccagaatggggaacat 10959 Query: 206 tctgctcgggtttcagggtttcaacaagagcagttctgcgcagcagatattgtctgacca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10958 tctgctcgggtttcagggtttcaacaagagcagttctgcgcagcagatattgtctgacca 10899 Query: 266 ctcacattcgtcaaatgcccagccattggacgataatgatcgcattttttcattaagttc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10898 ctcacattcgtcaaatgcccagccattggacgataatgatcgcattttttcattaagttc 10839 Query: 326 gtacctttttgcaaaacaattggctgcttccaatcatcaagaacaaacgaagtccaatga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10838 gtacctttttgcaaaacaattggctgcttccaatcatcaagaacaaacgaagtccaatga 10779 Query: 386 ttgaacaggaagcttatctgtttgccctcttcactgagacatatccaggtccaggacacc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10778 ttgaacaggaagcttatctgtttgccctcttcactgagacatatccaggtccaggacacc 10719 Query: 446 ggacacaagagacaagagacaagagacaagagaaactaagggagggggaagaaaaacggt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10718 ggacacaagagacaagagacaagagacaagagaaactaagggagggggaagaaaaacggt 10659 Query: 506 attattttaccccgcatctatttctcttgaagcactctttaaatgctcgtgataattaat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10658 attattttaccccgcatctatttctcttgaagcactctttaaatgctcgtgataattaat 10599 Query: 566 cactttgtaacattatgtattctctcttcctaaagtattttcaattacttacccttaatt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10598 cactttgtaacattatgtattctctcttcctaaagtattttcaattacttacccttaatt 10539 Query: 626 tttgagaggcctctttttctttttatccgtcagatcaacgatcatagaatcagtttaatc 685 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10538 tttgagaggcctctttttcttttcatccgtcagatcaacgatcatagaatcagtttaatc 10479 Query: 686 aataaaacttgcgtcaaactactcgtagaagcaaaggattgaatcgtttacagattttca 745 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10478 aataaaacttgcgtcaaactactcgtagaagcaaaggattgaatcgtttacagatttcca 10419 Query: 746 gttcaacccgaattgt-ccaatgtcttagatgagactcaggtgctatgtaaaggcggatg 804 || ||| ||||||||| |||||||||||||||||||||||||||||||||| || | ||| Sbjct: 10418 gtccaa-ccgaattgtcccaatgtcttagatgagactcaggtgctatgtaatggtgtatg 10360 Query: 805 tatgtgtgggtagcatgaattctaaccttcattcttggatgttaattgga-tattactca 863 ||||||||| |||||||||||||||||| |||||||| ||||||||||| ||| ||||| Sbjct: 10359 tatgtgtggttagcatgaattctaacctccattcttgattgttaattggagtatcactca 10300 Query: 864 accaatca 871 ||||||| Sbjct: 10299 gccaatca 10292 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7021 Number of Sequences: 1807 Number of extensions: 7021 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)