BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC50ZG03FM1.SCF screened BAC_end
         (953 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1686                                                        1362   0.0  

>3x_Contig1686 
          Length = 15382

 Score = 1362 bits (687), Expect = 0.0
 Identities = 768/791 (97%), Gaps = 3/791 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    ttccagcttgagcctctgtagctcttgccaacgggtcaactgtgcttgtttgtgtaaatc 145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11002 ttccagcttgagcctctgtagctcttgccaacgggtcaactgtgcttgtttgtgtaaatc 10943

                                                                         
Query: 146   gaacccaaacacttttggaacgtatcttttcgttgggtgtttcggacacatctcggggaa 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10942 gaacccaaacacttttggaacgtatcttttcgttgggtgtttcggacacatctcggggaa 10883

                                                                         
Query: 206   tccttgcaagaacattccgggaaagctggtaccgaaatacgctccgtcaatggcactatg 265
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10882 tccttgcaagaacattccgggaaagctggtaccgaaatacgctccgtcaatggcactatg 10823

                                                                         
Query: 266   tctgcttgactttggattgtaaagatcttcacaacttggacaatatagtttcacacagtc 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10822 tctgcttgactttggattgtaaagatcttcacaacttggacaatatagtttcacacagtc 10763

                                                                         
Query: 326   aatgcccggtatgtcatgtagtccaacaggaagtagcggttgatggttacaatgatacct 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10762 aatgcccggtatgtcatgtagtccaacaggaagtagcggttgatggttacaatgatacct 10703

                                                                         
Query: 386   ggggcaccttccaaaatcggccgctttgtatttctgtagcatcttctgtaaacctttcgc 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10702 ggggcaccttccaaaatcggccgctttgtatttctgtagcatcttctgtaaacctttcgc 10643

                                                                         
Query: 446   cgtgataatgtaacgtgcatggatcaatccgtacagcttccttgtatccgtttccaattg 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10642 cgtgataatgtaacgtgcatggatcaatccgtacagcttccttgtatccgtttccaattg 10583

                                                                         
Query: 506   ttctaaacgtgctggtgacatgctctcgatgatgccttcttcaagatcatccaccatata 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10582 ttctaaacgtgctggtgacatgctctcgatgatgccttcttcaagatcatccaccatata 10523

                                                                         
Query: 566   ttgtaccacagtggtaaacttagatactgtcttttgtaaattgattagattgaacctatc 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10522 ttgtaccacagtggtaaacttagatactgtcttttgtaaattgattagattgaacctatc 10463

                                                                         
Query: 626   cgtgatgtattccgtatcaatgtcacagaaatattcatggcctttttttccaagaaacaa 685
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 10462 cgtgatgtattccgtatcaatgtcacagaaatattcatggccttttttcccaagaaacaa 10403

                                                                         
Query: 686   atcaatccaatattccacgtactctgccgaattcgatccatcatcttgatcatttactac 745
             ||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||
Sbjct: 10402 atcaatccaatattccacgtactcgcccgaatccgatccatcatcttgatcatttactac 10343

                                                                         
Query: 746   tagagcattagccataactacgttccggttgtttagtggtcctcacaatttttttacaga 805
             |||||||| ||||||||||||| |||||||||| |||||||  |||| | | || |  ||
Sbjct: 10342 tagagcatcagccataactacg-tccggttgttcagtggtctccacactctcttca-gga 10285

                                                                         
Query: 806   atggccatctccttttgaacccgatgattttagatattggatttaaacctccta-gaaaa 864
             || | |||||||| ||||||| ||||||| ||||||| | |||||||||||||| |||||
Sbjct: 10284 attgacatctcctattgaacctgatgattctagatatcgaatttaaacctcctaggaaaa 10225

                        
Query: 865   aaaaaatgagg 875
             |||||||||||
Sbjct: 10224 aaaaaatgagg 10214


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7388
Number of Sequences: 1807
Number of extensions: 7388
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)