BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC50ZG03RM1.SCF screened BAC_end
         (960 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig197                                                         1643   0.0  

>3x_Contig197 
          Length = 1712

 Score = 1643 bits (829), Expect = 0.0
 Identities = 899/916 (98%), Gaps = 6/916 (0%)
 Strand = Plus / Minus

                                                                        
Query: 45   gctttatattattgatgtttcgcaatccgtacaaccagaacatcctatgtctctagattt 104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1480 gctttatattattgatgtttcgcaatccgtacaaccagaacatcctatgtctctagattt 1421

                                                                        
Query: 105  cctaagaatggatattaagaatgttaactcatatttccaaaaattgggaattgacatttt 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1420 cctaagaatggatattaagaatgttaactcatatttccaaaaattgggaattgacatttt 1361

                                                                        
Query: 165  ccctgaacgggtgatcttccagttcatcatcagtgaggtcttagacaaattcaagggtga 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1360 ccctgaacgggtgatcttccagttcatcatcagtgaggtcttagacaaattcaagggtga 1301

                                                                        
Query: 225  ttacagatcaagcgatgatctagaaacatatgttgccgacaatttacctctaaagttgac 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 ttacagatcaagcgatgatctagaaacatatgttgccgacaatttacctctaaagttgac 1241

                                                                        
Query: 285  tgatgaagacgaagctgaagatgaagtgttcagatctttacatttgataagaaatttggg 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1240 tgatgaagacgaagctgaagatgaagtgttcagatctttacatttgataagaaatttggg 1181

                                                                        
Query: 345  tggtttagaggaaagagattttgatagattcactgatggtaaatttgacctactgaaatc 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1180 tggtttagaggaaagagattttgatagattcactgatggtaaatttgacctactgaaatc 1121

                                                                        
Query: 405  attaattgctaatgaaaacaggaaatattccgaaaatttcacagcatcggagcaatatga 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1120 attaattgctaatgaaaacaggaaatattccgaaaatttcacagcatcggagcaatatga 1061

                                                                        
Query: 465  actctcttcttctgatgacgaggaagatgacgtagatggtgatgatctccctaacctcgt 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 actctcttcttctgatgacgaggaagatgacgtagatggtgatgatctccctaacctcgt 1001

                                                                        
Query: 525  aacggatatcaatgaagatgacatagctggatcagatgaagatgatgatagtgatgaaac 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 aacggatatcaatgaagatgacatagctggatcagatgaagatgatgatagtgatgaaac 941

                                                                        
Query: 585  taacgatagttctgatggtgatggatgggtctccgataaagacactccactgaaagg-aa 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 940  taacgatagttctgatggtgatggatgggtctccgataaagacactccactgaaaggaaa 881

                                                                        
Query: 644  aaaagtacgaagataaagatgctaaaaaacaacgtaagcaagaaacaaaagaagccaaac 703
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 880  aaaagtacgaagataaagatgctaaaaaacaacgtaagcaagaaacaaaagaggccaaac 821

                                                                        
Query: 704  gtgaaaagaggaagaccaaagtaaaaaaacacgttaagaaaaagctcattaacaagacga 763
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820  gtgaaaagaggaagaccaaagtaaaaaaacacgttaagaaaaagctcattaacaagacga 761

                                                                        
Query: 764  anagcaagaaatgatcaatttaanaattctatgncatttcaaatatttaatattttactt 823
            | ||||||||||||||||||||| |||||||||  || |||||||||||||| |||||||
Sbjct: 760  aaagcaagaaatgatcaatttaaaaattctatgcaatgtcaaatatttaata-tttactt 702

                                                                        
Query: 824  agcgattttaaatagatccaccgcttttgatgtttgccctacaagacctgccatttccaa 883
            |||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 701  agcgatgttaaatagatccaccgc-tttgatg-ttgccctacaagacctgccatttccaa 644

                                                                        
Query: 884  taatgcacgatcttctnccatgctttgtaagttgatctttggcctttctttggncttcgg 943
            |||||||||||||||| ||||||||||||||||||||||| ||| |||||| | ||||||
Sbjct: 643  taatgcacgatcttctcccatgctttgtaagttgatcttttgcc-ttcttttggcttcgg 585

                            
Query: 944  cctccttcccattgcc 959
            ||| ||||||||||||
Sbjct: 584  cct-cttcccattgcc 570


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9376
Number of Sequences: 1807
Number of extensions: 9376
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 1
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)