BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZG07FM1.SCF screened BAC_end (904 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1220 1560 0.0 >3x_Contig1220 Length = 4729 Score = 1560 bits (787), Expect = 0.0 Identities = 810/818 (99%) Strand = Plus / Minus Query: 87 tggtgtaccgtccgcattccaggtttcgaaatacctataattcaaatgggtggttggcgc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4258 tggtgtaccgtccgcattccaggtttcgaaatacctataattcaaatgggtggttggcgc 4199 Query: 147 atgtggattaattggatgaataaccatagagagaccacaggcgaagaattttactcctgt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4198 atgtggattaattggatgaataaccatagagagaccacaggcgaagaattttactcctgt 4139 Query: 207 tgcatctggttcaccagttgcaggatcaataggcagatgcaaatttttgtggtccgcttt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4138 tgcatctggttcaccagttgcaggatcaataggcagatgcaaatttttgtggtccgcttt 4079 Query: 267 catagccttgatagcaggtggactcaagttcccatgaaccacactgacattaacaccacc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4078 catagccttgatagcaggtggactcaagttcccatgaaccacactgacattaacaccacc 4019 Query: 327 tttctcaaacgtagtaccattctgcaacaccatcgagacaccgccaccaccgttgttgcc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4018 tttctcaaacgtagtaccattctgcaacaccatcgagacaccgccaccaccgttgttgcc 3959 Query: 387 acgatcccaagaatcggcttgaaactttacagtatccaaagtttccagacccttggtaat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3958 acgatcccaagaatcggcttgaaactttacagtatccaaagtttccagacccttggtaat 3899 Query: 447 ttcttgctgtttccggcgcactaaggcctccattctctctctaattggcacttgtgaatc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3898 ttcttgctgtttccggcgcactaaggcctccattctctctctaattggcacttgtgaatc 3839 Query: 507 tgtcatcgcacaatgataatatttagaatgtgtgttaagatgaaccggtcgttgagtttc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3838 tgtcatcgcacaatgataatatttagaatgtgtgttaagatgaaccggtcgttgagtttc 3779 Query: 567 tgtttgctttaccagacaagtatactggatgtaaagttttatcaatgattctgcttgatt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3778 tgtttgctttaccagacaagtatactggatgtaaagttttatcaatgattctgcttgatt 3719 Query: 627 ggagagaaaagggcagtatagatccaatgcttctcttctcatttcagttggtgagtcgaa 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3718 ggagagaaaagggcagtatagatccaatgcttctcttctcatttcagttggtgagtcgaa 3659 Query: 687 tggaataattcactttcgttaatatagtcaaaaaaaaaaaatccaaaaagcaagcagact 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3658 tggaataattcactttcgttaatatagtcaaaaaaaaaaaatccaaaaagcaagcagact 3599 Query: 747 tcaagattcagacctggtgataatttgcataaaggtaattgaagaaaaaaggctagctag 806 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3598 tcaagattcagacctggtgataatttggataaaggtaattgaagaaaaaaggctagctag 3539 Query: 807 tttccaccgcatacaggaagagggaaagatacgagatacaaggatctcatcacaatattg 866 ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| || Sbjct: 3538 tttccaccgcatacaggaagaggaaaagatacgagatacaagaatctcatcacaatagtg 3479 Query: 867 gcagttcgagcaccccaagnagaatataatacactact 904 ||||| |||||||| |||| ||||||||||||||||| Sbjct: 3478 gcagtccgagcaccacaagatgaatataatacactact 3441 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,005 Number of Sequences: 1807 Number of extensions: 12005 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 904 length of database: 10,358,551 effective HSP length: 16 effective length of query: 888 effective length of database: 10,329,639 effective search space: 9172719432 effective search space used: 9172719432 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)