BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC50ZG08FM1.SCF screened BAC_end
         (915 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1581                                                        1509   0.0  

>3x_Contig1581 
          Length = 11429

 Score = 1509 bits (761), Expect = 0.0
 Identities = 808/820 (98%), Gaps = 3/820 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   taacagaatgcaccaaggaaactggaatcaaagatgtggatttatgagaggtaatatgcc 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6000 taacagaatgcaccaaggaaactggaatcaaagatgtggatttatgagaggtaatatgcc 5941

                                                                        
Query: 146  ctacaaattggaaaatacccattgggaaagttgtataccatatgactttagatggtacca 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5940 ctacaaattggaaaatacccattgggaaagttgtataccatatgactttagatggtacca 5881

                                                                        
Query: 206  ggaaagtgtttaatatgcatctcgaaaatgatccattcaaataagtgggtagaattcctt 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5880 ggaaagtgtttaatatgcatctcgaaaatgatccattcaaataagtgggtagaattcctt 5821

                                                                        
Query: 266  ccgggaagtttagaactgtattcttcaattttgatgaagatacctgtggtgcatgcaaat 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5820 ccgggaagtttagaactgtattcttcaattttgatgaagatacctgtggtgcatgcaaat 5761

                                                                        
Query: 326  agttagcaaacgttacaaacgcgagacatagcgatgcgcttagaaggaactgcaattccg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5760 agttagcaaacgttacaaacgcgagacatagcgatgcgcttagaaggaactgcaattccg 5701

                                                                        
Query: 386  ttaaaccaacaggatgtggaaatcgggataaaatggcttttgacaggtttgatgaaacag 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5700 ttaaaccaacaggatgtggaaatcgggataaaatggcttttgacaggtttgatgaaacag 5641

                                                                        
Query: 446  aagaagtcatataccatataaggcataaaatagatatgtgaacattcacttccggtaaat 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5640 aagaagtcatataccatataaggcataaaatagatatgtgaacattcacttccggtaaat 5581

                                                                        
Query: 506  actcttgtacatccttgggaaatagattgacaaattgctctttccacgtctgattttgca 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5580 actcttgtacatccttgggaaatagattgacaaattgctctttccacgtctgattttgca 5521

                                                                        
Query: 566  gtcttctgacctcattgaacgaagttgaatgtttatgagacctgtaattttcctggaacg 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5520 gtcttctgacctcattgaacgaagttgaatgtttatgagacctgtaattttcctggaacg 5461

                                                                        
Query: 626  gtatttgtacctggttgacaaagttaacatctgaaaatgttttattgatcgaaggacggc 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5460 gtatttgtacctggttgacaaagttaacatctgaaaatgttttattgatcgaaggacggc 5401

                                                                        
Query: 686  gcttcgaagtgacgctcttggaagttacaatcatttttcgcttattttattcacaccttc 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5400 gcttcgaagtgacgctcttggaagttacaatcatttttcgcttattttattcacaccttc 5341

                                                                        
Query: 746  ttaaaatcaataaagcgagtggaacgaaagtgaatgagaaatatttagcanacgatagaa 805
            ||||||||||||||||||||||||||||  ||||||||||  |||||||| |||||||||
Sbjct: 5340 ttaaaatcaataaagcgagtggaacgaagttgaatgagaataatttagcaaacgatagaa 5281

                                                                        
Query: 806  tagatcggaaagaactgttactttatggagcgagcagcgatttt-gagccgactgtcact 864
            ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5280 tagatcgaaaagaactgttactttatggagcgagcagcgattttagagccgactgtcact 5221

                                                    
Query: 865  at-taagaagta-ctctttctatttacagtcgccaaaaat 902
            || ||||||||| |||||||||||   |||||||||||||
Sbjct: 5220 atgtaagaagtatctctttctattacaagtcgccaaaaat 5181


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6239
Number of Sequences: 1807
Number of extensions: 6239
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)