BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZG08FM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1581 1509 0.0 >3x_Contig1581 Length = 11429 Score = 1509 bits (761), Expect = 0.0 Identities = 808/820 (98%), Gaps = 3/820 (0%) Strand = Plus / Minus Query: 86 taacagaatgcaccaaggaaactggaatcaaagatgtggatttatgagaggtaatatgcc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6000 taacagaatgcaccaaggaaactggaatcaaagatgtggatttatgagaggtaatatgcc 5941 Query: 146 ctacaaattggaaaatacccattgggaaagttgtataccatatgactttagatggtacca 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5940 ctacaaattggaaaatacccattgggaaagttgtataccatatgactttagatggtacca 5881 Query: 206 ggaaagtgtttaatatgcatctcgaaaatgatccattcaaataagtgggtagaattcctt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5880 ggaaagtgtttaatatgcatctcgaaaatgatccattcaaataagtgggtagaattcctt 5821 Query: 266 ccgggaagtttagaactgtattcttcaattttgatgaagatacctgtggtgcatgcaaat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5820 ccgggaagtttagaactgtattcttcaattttgatgaagatacctgtggtgcatgcaaat 5761 Query: 326 agttagcaaacgttacaaacgcgagacatagcgatgcgcttagaaggaactgcaattccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5760 agttagcaaacgttacaaacgcgagacatagcgatgcgcttagaaggaactgcaattccg 5701 Query: 386 ttaaaccaacaggatgtggaaatcgggataaaatggcttttgacaggtttgatgaaacag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5700 ttaaaccaacaggatgtggaaatcgggataaaatggcttttgacaggtttgatgaaacag 5641 Query: 446 aagaagtcatataccatataaggcataaaatagatatgtgaacattcacttccggtaaat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5640 aagaagtcatataccatataaggcataaaatagatatgtgaacattcacttccggtaaat 5581 Query: 506 actcttgtacatccttgggaaatagattgacaaattgctctttccacgtctgattttgca 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5580 actcttgtacatccttgggaaatagattgacaaattgctctttccacgtctgattttgca 5521 Query: 566 gtcttctgacctcattgaacgaagttgaatgtttatgagacctgtaattttcctggaacg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5520 gtcttctgacctcattgaacgaagttgaatgtttatgagacctgtaattttcctggaacg 5461 Query: 626 gtatttgtacctggttgacaaagttaacatctgaaaatgttttattgatcgaaggacggc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5460 gtatttgtacctggttgacaaagttaacatctgaaaatgttttattgatcgaaggacggc 5401 Query: 686 gcttcgaagtgacgctcttggaagttacaatcatttttcgcttattttattcacaccttc 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5400 gcttcgaagtgacgctcttggaagttacaatcatttttcgcttattttattcacaccttc 5341 Query: 746 ttaaaatcaataaagcgagtggaacgaaagtgaatgagaaatatttagcanacgatagaa 805 |||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| Sbjct: 5340 ttaaaatcaataaagcgagtggaacgaagttgaatgagaataatttagcaaacgatagaa 5281 Query: 806 tagatcggaaagaactgttactttatggagcgagcagcgatttt-gagccgactgtcact 864 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5280 tagatcgaaaagaactgttactttatggagcgagcagcgattttagagccgactgtcact 5221 Query: 865 at-taagaagta-ctctttctatttacagtcgccaaaaat 902 || ||||||||| ||||||||||| ||||||||||||| Sbjct: 5220 atgtaagaagtatctctttctattacaagtcgccaaaaat 5181 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6239 Number of Sequences: 1807 Number of extensions: 6239 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)