BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZH01RM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1214 1366 0.0 >3x_Contig1214 Length = 6334 Score = 1366 bits (689), Expect = 0.0 Identities = 769/789 (97%), Gaps = 5/789 (0%) Strand = Plus / Plus Query: 48 ttacaagaagttgcttccaagacaaacgaagctgccggtgacggtaccacttctgccact 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4718 ttacaagaagttgcttccaagacaaacgaagctgccggtgacggtaccacttctgccact 4777 Query: 108 gtcttaggtaaggccattttcactgaatccgttaagaatgttgcagctggttgtaaccca 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4778 gtcttaggtaaggccattttcactgaatccgttaagaatgttgcagctggttgtaaccca 4837 Query: 168 atggatttgagaagaggtactcaagctgctgtcgaaaaagtaattcaattcttgtcagag 227 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4838 atggatttgagaagaggtactcaagctgctgtcgaaaaagtaattcaatacttgtcagag 4897 Query: 228 aacaagaaagaaatcaccacttctgctgaaatcgctcaagtggcaactatttctgccaac 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4898 aacaagaaagaaatcaccacttctgctgaaatcgctcaagtggcaactatttctgccaac 4957 Query: 288 ggggatgctcacgttggtaagttgttggcttcagccatggaaaaagttggtaaggaaggt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4958 ggggatgctcacgttggtaagttgttggcttcagccatggaaaaagttggtaaggaaggt 5017 Query: 348 gtcatcactatcagagagggtagaaccttggaagatgaattggaagtcactgaaggtatg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5018 gtcatcactatcagagagggtagaaccttggaagatgaattggaagtcactgaaggtatg 5077 Query: 408 agattcgaccgtggtttcatttctccatactttattaccgacgctaaatctggtaaggtg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5078 agattcgaccgtggtttcatttctccatactttattaccgacgctaaatctggtaaggtg 5137 Query: 468 gaatttgaaaaacctttgatcttattgagtgaaaagaagatctcctcaatccaggatatc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5138 gaatttgaaaaacctttgatcttattgagtgaaaagaagatctcctcaatccaggatatc 5197 Query: 528 ttgccttctttggaattgtcaaaccaaaccagaagaccattgttgatcatcgccgaagat 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5198 ttgccttctttggaattgtcaaaccaaaccagaagaccattgttgatcatcgccgaagat 5257 Query: 588 attgatggcgaagctttggctgcttgtattttgaacaagttgagaggtcaagttcaagtt 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5258 attgatggcgaagctttggctgcttgtattttgaacaagttgagaggtcaagttcaagtt 5317 Query: 648 tgtgccgttaaagctccaggtttcggtgattacaggaagaacaccttgggcgatattgcc 707 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5318 tgtgccgttaaagctccaggtttcggtgataacaggaagaacaccttgggcgatattgcc 5377 Query: 708 atcttgtctggtggtaccgtctttccttgagaaattgga-ctaaagccagaaaacgcttc 766 ||||||||||||||||| ||| ||| ||| ||||||| |||||||||||||||||| | Sbjct: 5378 atcttgtctggtggtactgtc-ttcactgaagaattggacctaaagccagaaaacgctac 5436 Query: 767 cattccacattttgggttcttgggaatcttgtttctattaccaagggaagaatcccttat 826 ||| | ||| |||||||||||| || || ||||||||||||||| |||||| || |||| Sbjct: 5437 catccaaca-tttgggttcttgtgattc-tgtttctattaccaa-ggaagataccgttat 5493 Query: 827 cttgaatgg 835 ||||||||| Sbjct: 5494 cttgaatgg 5502 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8228 Number of Sequences: 1807 Number of extensions: 8228 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)