BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZH02FM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1379 1447 0.0 >3x_Contig1379 Length = 6767 Score = 1447 bits (730), Expect = 0.0 Identities = 815/833 (97%), Gaps = 8/833 (0%) Strand = Plus / Minus Query: 86 attatcatgccaaccagccctcttcttcagaagctccgggattacttccattgtcgcatg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3662 attatcatgccaaccagccctcttcttcagaagctccgggattacttccattgtcgcatg 3603 Query: 146 gcggatcgtcttcgaagttttcttcctttgcagacacaactgttgatgttaccgatgacg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3602 gcggatcgtcttcgaagttttcttcctttgcagacacaactgttgatgttaccgatgacg 3543 Query: 206 ttaataatttgacctgtttcttgaaagatactacaattaacgatatctcactcggttcaa 265 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3542 ttaataatttgaccagtttcttgaaagatactacaattaacgatatctcactcggttcaa 3483 Query: 266 ctagtagtattccggcacaaaatctggatcctgttaacatggcaccacgtccgcaatctg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3482 ctagtagtattccggcacaaaatctggatcctgttaacatggcaccacgtccgcaatctg 3423 Query: 326 ctgtttacaaccaaccaaatctttggaacaatgatccaaatcaaaggctctcaaactttg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3422 ctgtttacaaccaaccaaatctttggaacaatgatccaaatcaaaggctctcaaactttg 3363 Query: 386 gtcaacagcacgttcaacagaacccaatctcctcgtcacactctcaaccaagaagatcta 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3362 gtcaacagcacgttcaacagaacccaatctcctcgtcacactctcaaccaagaagatcta 3303 Query: 446 tttgggatactggagctgaaaatacctttggtgttgcctctgctaacaattttgcttcga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3302 tttgggatactggagctgaaaatacctttggtgttgcctctgctaacaattttgcttcga 3243 Query: 506 atatctgggatacacctacatctactccagcacttccgaacaccctgctatcttcccaag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3242 atatctgggatacacctacatctactccagcacttccgaacaccctgctatcttcccaag 3183 Query: 566 ttgcagcaacatctgttgactcatatgaggaagtcctagccaagacctataagatgcttt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3182 ttgcagcaacatctgttgactcatatgaggaagtcctagccaagacctataagatgcttt 3123 Query: 626 ctccagacaatagtttcgttcccttggacaagctatatcaaacatcattgactcaaatta 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3122 ctccagacaatagtttcgttcccttggacaagctatatcaaacatcattgactcaaatta 3063 Query: 686 atgccaaatcagtactgtcgtatccccaa-tcattttcactttggtttccatgaagaatt 744 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 3062 atgccaaatcagtactgtcgtatccccaattcatttccactttggtttccatgaagaatt 3003 Query: 745 catacaatactgaactttntgaatgattacacggggtttattggcgtactgcagnatggg 804 |||||||||||||||||| |||||||| |||| ||||||||||||||||||||| || || Sbjct: 3002 catacaatactgaacttt-tgaatgataacac-gggtttattggcgtactgcagaat-gg 2946 Query: 805 gttctgttccagtacccatca-gatggccttttttataatagacaaaatacttttccctt 863 |||||||||||||| |||||| ||| ||| || |||||||||||||||||| ||||||| Sbjct: 2945 gttctgttccagta-ccatcaggattgcc-ttcttataatagacaaaatac-tttccctc 2889 Query: 864 atgcaaccactcaagttcaatccaattcgcagcaaataaactcagtttcaact 916 ||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 2888 atgcaaccactcaagttcagtcagattcgcagcaaataaactcagtttcaact 2836 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5970 Number of Sequences: 1807 Number of extensions: 5970 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)