BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZH02RM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig533 1639 0.0 >3x_Contig533 Length = 2268 Score = 1639 bits (827), Expect = 0.0 Identities = 861/867 (99%), Gaps = 4/867 (0%) Strand = Plus / Plus Query: 48 cctgctcttctgttttatatttaaaggtaaccttgaaatttgaagcagttacagaaaatg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 cctgctcttctgttttatatttaaaggtaaccttgaaatttgaagcagttacagaaaatg 593 Query: 108 ttaataacaaatattgcgttcacatacaaactgttactcaaacaaagagagtacaattgg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 ttaataacaaatattgcgttcacatacaaactgttactcaaacaaagagagtacaattgg 653 Query: 168 aacaaattacacttaaaccgccaattaccaatcaataaatcaaattaacatgtcagttca 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 aacaaattacacttaaaccgccaattaccaatcaataaatcaaattaacatgtcagttca 713 Query: 228 cactccagaagttttatgggctcaacgttcaagcgaatccgatgataccaagaacaattt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 cactccagaagttttatgggctcaacgttcaagcgaatccgatgataccaagaacaattt 773 Query: 288 gttcattaccatcaatattccagactgtacgaaccctaaaatggaattaaccgaaaattc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 gttcattaccatcaatattccagactgtacgaaccctaaaatggaattaaccgaaaattc 833 Query: 348 tttggaattcagtgcactatctaagtatcacagtaaagatgggatcaaataccatttgca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 tttggaattcagtgcactatctaagtatcacagtaaagatgggatcaaataccatttgca 893 Query: 408 cattgacttctacaagccaattgatacggaaaactcggagcagagggtagctaacggtag 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 cattgacttctacaagccaattgatacggaaaactcggagcagagggtagctaacggtag 953 Query: 468 aaactactttttggtgttaaggaagaaagatttaggccttgaatactggcccagattgac 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 aaactactttttggtgttaaggaagaaagatttaggccttgaatactggcccagattgac 1013 Query: 528 caaggagaagcttaagtatcattacattaaaaccgactttgataaatgggttgacgaaga 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1014 caaggagaagcttaagtatcattacattaaaaccgactttgataaatgggttgacgaaga 1073 Query: 588 tgaacaagaagagaatgttgctgctgataacgacttgatgtcacaatttggccaaatggg 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1074 tgaacaagaagagaatgttgctgctgataacgacttgatgtcacaatttggccaaatggg 1133 Query: 648 gggcgctggcttccctggaatggaacaaggtttcaatccacaagccttcgctgacgccgg 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1134 gggcgctggcttccctggaatggaacaaggtttcaatccacaagccttcgctgacgccgg 1193 Query: 708 aatcaacctggatgaggcattaccagaagaagatgatgaagatgacgaagaaaaagctga 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 aatcaacctggatgaggcattaccagaagaagatgatgaagatgacgaagaaaaagctga 1253 Query: 768 ataggtatgatcggatggtctgcaaaggcgatttctatcaagatttaattcatttatttt 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1254 ataggtatgatcggatggtctgcaaaggcgatttctatcaagatttaattcattta-ttt 1312 Query: 828 gctgtatacagtcatgcgcatatataagtgtattaatacgaacaaaaa-ttctattatat 886 |||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| Sbjct: 1313 gctgtatacagtcatgcgcatatataggtgtataaatacgaacaaaaatttctattatat 1372 Query: 887 attatg-atattgagccggctttgaat 912 |||||| |||||||| ||||||||||| Sbjct: 1373 attatgcatattgag-cggctttgaat 1398 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8639 Number of Sequences: 1807 Number of extensions: 8639 Number of successful extensions: 126 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)