BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC50ZH09RM1.SCF screened BAC_end (991 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1659 1277 0.0 >3x_Contig1659 Length = 17570 Score = 1277 bits (644), Expect = 0.0 Identities = 678/684 (99%), Gaps = 4/684 (0%) Strand = Plus / Plus Query: 46 caccttcctttggatgaactctcatgatcaagttcttacctggagctagagtagtcaaac 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 caccttcctttggatgaactctcatgatcaagttcttacctggagctagagtagtcaaac 385 Query: 106 ccaagatgtcgatggtgtcatctgggttgatcttgtcgtaagcagctggttcagcaaagt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 ccaagatgtcgatggtgtcatctgggttgatcttgtcgtaagcagctggttcagcaaagt 445 Query: 166 tcaaaggcaacataccttgtttcttcaagttagtttcgtgaattcttgcgaaggatttgg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 tcaaaggcaacataccttgtttcttcaagttagtttcgtgaattcttgcgaaggatttgg 505 Query: 226 taataatagcgaaaccacccaagaatcttggttccaaggcagcgtgttcacgagaagaac 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 506 taataatagcgaaaccacccaagaatcttggttccaaggcagcgtgttcacgagaagaac 565 Query: 286 cttcaccgaagttttcaccaccaatgacaacccatctgatacctgcatctctgtaagctc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 cttcaccgaagttttcaccaccaatgacaacccatctgatacctgcatctctgtaagctc 625 Query: 346 tagcagtgtctggaacaccggcgtattcaccagtgtagtggtgcttgacacagttagcct 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 tagcagtgtctggaacaccggcgtattcaccagtgtagtggtgcttgacacagttagcct 685 Query: 406 tcttgttttcagcgttaatagcaccaatcatatagttgtttgaaatgttttccaaatgac 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 686 tcttgttttcagcgttaatagcaccaatcatatagttgtttgaaatgttttccaaatgac 745 Query: 466 ctctgtacttcaaccatggaccagccatagagatatggtcagtggtggtcttacctagag 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 ctctgtacttcaaccatggaccagccatagagatatggtcagtggtggtcttacctagag 805 Query: 526 atttgatcaagattggcatatcgaaagcatccttaccattccaagccttgaaaggtttca 585 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 806 atttgatcaagattggcatatcgaaagcatccttaccatcccaagccttgaaaggtttca 865 Query: 586 acaattgtagacggtcagacgttggagaaactt-gacagtaacggaagaacggtcctttg 644 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 866 acaattgtagacggtcagacgttggagaaacttggacagtaacggaagaacggtcctttg 925 Query: 645 gtggagcttggtaagtgttttcaccttgggtcgtaacccttaaactggcaaaccaacacc 704 ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 926 gtggagcttggtaagtgttttcacc-tgggtcgtaaccctt-aactggcaaaccaacacc 983 Query: 705 agtttgtgggtttcaacatgaatt 728 |||| || |||||||||||||||| Sbjct: 984 agttggt-ggtttcaacatgaatt 1006 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7337 Number of Sequences: 1807 Number of extensions: 7337 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 991 length of database: 10,358,551 effective HSP length: 16 effective length of query: 975 effective length of database: 10,329,639 effective search space: 10071398025 effective search space used: 10071398025 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)