BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZA02RM1.SCF screened BAC_end (923 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1444 1279 0.0 >3x_Contig1444 Length = 7580 Score = 1279 bits (645), Expect = 0.0 Identities = 688/701 (98%), Gaps = 1/701 (0%) Strand = Plus / Plus Query: 45 gcttcttcgacaatgcatcatttataaagaaagtcattcggccatactcatcggtcctcg 104 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 4131 gcttcttcgacaatgcatcattcaaaaagaaagtcattcggccatactcatcggtcctcg 4190 Query: 105 atccaattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaa 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4191 atccaattataaagatatgataataaagcatcatttggaggctttaagatcgacacacaa 4250 Query: 165 cgaacaattcattgttatcaacttaaatggctctttacattcggaaaactctgtttttaa 224 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4251 cgaacaattcattgttatcaacttaaatggctctttacattcggaaaactctgcaattaa 4310 Query: 225 cagtattgctgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaa 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4311 cagtattgctgaacaattagaattcgaacttgcaaacagaaacgttaattcatcaaaaaa 4370 Query: 285 agttaaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4371 agttaaagcagaagaattaggtttatctgaaggtactttgacagaagtctttgataacat 4430 Query: 345 tctaagattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaaga 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4431 tctaagattgttggactcatttactgtgactcctctaaagggtgtacactcacagaaaga 4490 Query: 405 aaaatcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggacc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4491 aaaatcagagcacgtaacgctagtgttcatatttgatgaaattgacaaatttgctggacc 4550 Query: 465 agtgagacagacacttttgtataatttatttgacctagtagagacttcaaggataccagt 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4551 agtgagacagacacttttgtataatttatttgacctagtagagacttcaaggataccagt 4610 Query: 525 ttgtgttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaa 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4611 ttgtgttcttggtcttactacaaagttggcaatcatgcaatttcttgaaaacagagtgaa 4670 Query: 585 atcccggttttctcagcgaatcatatatatgccatcaatcttggattatgatcaattcaa 644 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4671 atcccggttttctcagcgaatcatatatatgccatcaatctcggattatgatcaattcaa 4730 Query: 645 gcatgtattcaaagagctcttacaggtggatgattcaacaattcctgatcagcttccatg 704 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 4731 gcatgtattcaaagagctcttagaggtggatgattcaacaattcctgatcagcttcgatg 4790 Query: 705 gaaccaggtctttgatgaggacttttaaaaatgactattca 745 ||||||| |||| ||||| |||||| ||||||||| ||||| Sbjct: 4791 gaaccagttcttggatga-gactttaaaaaatgacgattca 4830 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8081 Number of Sequences: 1807 Number of extensions: 8081 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 923 length of database: 10,358,551 effective HSP length: 16 effective length of query: 907 effective length of database: 10,329,639 effective search space: 9368982573 effective search space used: 9368982573 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)