BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZA03RM1.SCF screened BAC_end (1013 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig220 801 0.0 >3x_Contig220 Length = 1055 Score = 801 bits (404), Expect = 0.0 Identities = 444/452 (98%), Gaps = 4/452 (0%) Strand = Plus / Minus Query: 87 tataataaacagtctgattatcataagagaaggttccttaggaatttggatgaagaagtg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 tataataaacagtctgattatcataagagaaggttccttaggaatttggatgaagaagtg 398 Query: 147 gatgaagagcaagtgaaagatgtgaaaagaaggaaaaccgataaggatggtgataaggaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 gatgaagagcaagtgaaagatgtgaaaagaaggaaaaccgataaggatggtgataaggaa 338 Query: 207 gaggaaagtggcggtggatatacgatgcccaagacttcgcagcatattattattgagctc 266 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 337 gaggaaagtggcggtggatatacgatgcccaagacttcgcagcatattataactgagctc 278 Query: 267 tcggaagagatggttactgaagttccaggggtacgtaatcttcagttctttaagccttca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 tcggaagagatggttactgaagttccaggggtacgtaatcttcagttctttaagccttca 218 Query: 327 gacagacaacatttcgcaattttgtttgatgaaaggtctccagaagatatgactgaagag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gacagacaacatttcgcaattttgtttgatgaaaggtctccagaagatatgactgaagag 158 Query: 387 gaaaggaaacagaaacaggttttaaaattggtacttaaggtgaaaaatgggttaccaagc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 gaaaggaaacagaaacaggttttaaaattggtacttaaggtgaaaaatgggttaccaagc 98 Query: 447 tctaggaaaatagctctcagagcactcactcaaaaggcacc-ctcttt-cggggcaccat 504 ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 97 tctaggaaaatagctctcagagcactcactcaaaaggcacctctctttgcggggcaccat 38 Query: 505 tgtt-atttgatttgatctttgcccattcttc 535 |||| |||||||| ||| ||||||||||||| Sbjct: 37 tgttgatttgattctatc-ttgcccattcttc 7 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7564 Number of Sequences: 1807 Number of extensions: 7564 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 1013 length of database: 10,358,551 effective HSP length: 16 effective length of query: 997 effective length of database: 10,329,639 effective search space: 10298650083 effective search space used: 10298650083 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)