BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZA05RM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1409 1003 0.0 >3x_Contig1409 Length = 9404 Score = 1003 bits (506), Expect = 0.0 Identities = 609/638 (95%), Gaps = 4/638 (0%) Strand = Plus / Plus Query: 45 ctttcaagttccgttcgaagagaaggcggcaggttttctggcacgctgaaatccaacgac 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8481 ctttcaagttccgttcgaagagaaggcggcaggttttctggcacgctgaaatccaacgac 8540 Query: 105 gtagataattcggacatattgtttaggattcaggtgcttcaccgattgaagtacccttga 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8541 gtagataattcggacatattgtttaggattcaggtgcttcaccgattgaagtacccttga 8600 Query: 165 atacactttttatcgcagaggaacaccaggtttatgtatgtcgcacggaatgtattttcc 224 |||||||||||||||||||||||||||||||||||||||||||||||||||| | | || Sbjct: 8601 atacactttttatcgcagaggaacaccaggtttatgtatgtcgcacggaatgaaact-cc 8659 Query: 225 atattcctaatgtttgatgttatcccagttattatatattgtggaaataatgatacaaat 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8660 atattcctaatgtttgatgttatcccagttattatatattgtggaaataatgatacaaat 8719 Query: 285 taaaggtctggaacctttttttcgggggtttgtttttctgggacaactactagacgagaa 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8720 taaaggtctggaacctttttttcgggggtttgtttttctgggacaactactagacgagaa 8779 Query: 345 attgctccaaaaagcatattttaggcggaaaatagaatccttaaggaagtgataaaaccg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8780 attgctccaaaaagcatattttaggcggaaaatagaatccttaaggaagtgataaaaccg 8839 Query: 405 ttataacgctatggaatgagggc-ctatcagaattgcggtcaccaagttgtcttcatatt 463 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 8840 ttataacgctatggaatgagggctctatcagaattgcggtcaccaagttgtcttcatatt 8899 Query: 464 gatgtcaaagtattgcttgaagaatttagatggtacgacgaaaattgagtgtctgatcac 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8900 gatgtcaaagtattgcttgaagaatttagatggtacgacgaaaattgagtgtctgatcac 8959 Query: 524 tttcgctcaaaaaattcttgatcgactaaatgctgcgctgtgacctgtggctgaatcgat 583 || |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 8960 ttccgctcaaaaaattcttgatcgactaaattctgcgctgtgacgtgtggctgaatcgat 9019 Query: 584 ttatagaacaattattggtttattttttaagcttcgaagccttcagccttgcaaaaatta 643 || ||||||| || |||| ||| | ||||| ||||| || |||||| |||||| | | Sbjct: 9020 atagagaacaagta-tggtctatctcataagc-tcgaaagctccagcctcgcaaaagtca 9077 Query: 644 tatttttcaaattattatcatgccgtttaacaagcgcc 681 |||||| || || || ||||||||| | |||||||||| Sbjct: 9078 tattttacagatcatcatcatgccggtaaacaagcgcc 9115 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9269 Number of Sequences: 1807 Number of extensions: 9269 Number of successful extensions: 115 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)