BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZB02FM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1184 1063 0.0 3x_Contig1051 147 5e-35 3x_Contig1718 145 2e-34 3x_Contig844 145 2e-34 3x_Contig1747 143 7e-34 3x_Contig1468 143 7e-34 3x_Contig939 135 2e-31 >3x_Contig1184 Length = 5183 Score = 1063 bits (536), Expect = 0.0 Identities = 620/644 (96%), Gaps = 3/644 (0%) Strand = Plus / Minus Query: 89 catacttaccatgttgggtcctactggacactgtagttagatggcagaagattagattgt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2309 catacttaccatgttgggtcctactggacactgtagttagatggcagaagattagattgt 2250 Query: 149 aataagaaaatcacgtttgattatgaatgcacgtga-caaaagaactaaacatagtgctc 207 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2249 aataagaaaatcacgtttgattatgaatgcacgtgatcaaaagaactaaacatagtgctc 2190 Query: 208 gagagtttagtactttcaaaaaaaaagctcccgtggcgtaatggcaacgcgtctgacttc 267 |||||||||||||||| ||||||||||||||||||||||||||| || | || ||||||| Sbjct: 2189 gagagtttagtactttgaaaaaaaaagctcccgtggcgtaatgggaaggggtgtgacttc 2130 Query: 268 taatcagaagattgtgggttcgacccccaccgtgagtgcttttatttttttaattttttt 327 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 2129 taatcagaagattgtgttttt-acccccaccgtgagtgcttttatttttttaattttttt 2071 Query: 328 ttacatctctggtcttctttttctaaggaatgagagcattaggaaggaaggcattgctgc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2070 ttacatctctggtcttctttttctaaggaatgagagcattaggaaggaaggcattgctgc 2011 Query: 388 agcaatgttcataatatcaacagatactacccaccattttgtgttattcttttattcaac 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2010 agcaatgttcataatatcaacagatactacccaccattttgtgttattcttttattcaac 1951 Query: 448 gtacctatattatgtattatacagctctaatctttaagaacgtatgataataatctatag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1950 gtacctatattatgtattatacagctctaatctttaagaacgtatgataataatctatag 1891 Query: 508 ttaatgaaacattaaatactaatacgtcgcagacgcattaccgtttgtcatcggtgcaac 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1890 ttaatgaaacattaaatactaatacgtcgcagacgcattaccgtttgtcatcggtgcaac 1831 Query: 568 atgctcacaattgtctttgttatcgtcattggcctgagaattggagatgagcttttgatt 627 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1830 atgctcacaattgtctttgttatcgtcattgtcctgagaattggagatgagctttgattt 1771 Query: 628 ttcccatattttttcaagaccccctctgaaaatatctaccttggaatccatgactgttag 687 ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 1770 ttcccatattttttcaagacccctcttgaaaatatctacattgtaatccatgactgttag 1711 Query: 688 tcttgcttttatataag-attatcaggtcttattaacgttacta 730 |||||||| ||||| || || ||||||||| ||||||||||||| Sbjct: 1710 tcttgcttctatatcagtatcatcaggtctcattaacgttacta 1667 >3x_Contig1051 Length = 4315 Score = 147 bits (74), Expect = 5e-35 Identities = 77/78 (98%) Strand = Plus / Plus Query: 232 aagctcccgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgac 291 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3901 aagctcgcgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgac 3960 Query: 292 ccccaccgtgagtgcttt 309 |||||||||||||||||| Sbjct: 3961 ccccaccgtgagtgcttt 3978 >3x_Contig1718 Length = 19496 Score = 145 bits (73), Expect = 2e-34 Identities = 76/77 (98%) Strand = Plus / Minus Query: 233 agctcccgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgacc 292 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4418 agctcgcgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgacc 4359 Query: 293 cccaccgtgagtgcttt 309 ||||||||||||||||| Sbjct: 4358 cccaccgtgagtgcttt 4342 >3x_Contig844 Length = 2953 Score = 145 bits (73), Expect = 2e-34 Identities = 83/85 (97%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 234 gctcccgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgaccc 293 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1579 gctcgcgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgaccc 1638 Query: 294 ccaccgtgagtgcttttattttttt 318 ||||||||||||| ||||||||||| Sbjct: 1639 ccaccgtgagtgc-tttattttttt 1662 >3x_Contig1747 Length = 15671 Score = 143 bits (72), Expect = 7e-34 Identities = 75/76 (98%) Strand = Plus / Minus Query: 234 gctcccgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgaccc 293 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2555 gctcgcgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgaccc 2496 Query: 294 ccaccgtgagtgcttt 309 |||||||||||||||| Sbjct: 2495 ccaccgtgagtgcttt 2480 >3x_Contig1468 Length = 9852 Score = 143 bits (72), Expect = 7e-34 Identities = 75/76 (98%) Strand = Plus / Minus Query: 234 gctcccgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgaccc 293 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8709 gctcgcgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgaccc 8650 Query: 294 ccaccgtgagtgcttt 309 |||||||||||||||| Sbjct: 8649 ccaccgtgagtgcttt 8634 >3x_Contig939 Length = 3877 Score = 135 bits (68), Expect = 2e-31 Identities = 71/72 (98%) Strand = Plus / Minus Query: 234 gctcccgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgaccc 293 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2209 gctcgcgtggcgtaatggcaacgcgtctgacttctaatcagaagattgtgggttcgaccc 2150 Query: 294 ccaccgtgagtg 305 |||||||||||| Sbjct: 2149 ccaccgtgagtg 2138 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9139 Number of Sequences: 1807 Number of extensions: 9139 Number of successful extensions: 149 Number of sequences better than 1.0e-20: 7 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)