BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC5ZB02RM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig444                                                         1463   0.0  

>3x_Contig444 
          Length = 1306

 Score = 1463 bits (738), Expect = 0.0
 Identities = 780/790 (98%), Gaps = 3/790 (0%)
 Strand = Plus / Plus

                                                                       
Query: 44  cttttcttcattcatttctgatgcaattgaatcgattgccgttagttcccgttcctctgg 103
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 cttttcttcattcatttctgatgcaattgaatcgattgccgttagttcccgttcctctgg 258

                                                                       
Query: 104 cagtgcgaacgacctatttttagtattagaaacatttggtgcagaggtactttgattaaa 163
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cagtgcgaacgacctatttttagtattagaaacatttggtgcagaggtactttgattaaa 318

                                                                       
Query: 164 ttctgtggcttcggtttcattttgtgatagctttggtgtctcttgctttttattttaatt 223
           |||||||||||||||||||||||||||||||||||||||||||||||||| | |  ||||
Sbjct: 319 ttctgtggcttcggtttcattttgtgatagctttggtgtctcttgcttttcaatagaatt 378

                                                                       
Query: 224 ttggaaagcagttggctttgtaagtaaattctctttaactgctattttcacatcattctc 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttggaaagcagttggctttgtaagtaaattctctttaactgctattttcacatcattctc 438

                                                                       
Query: 284 ttcatttgacgatatgtcaccagagtcaatattaacgggtagtctaagggcattatacat 343
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttcatttgacgatatgtcaccagagtcaatattaacgggtagtctaagggcattatacat 498

                                                                       
Query: 344 ttttgatagaaagttgtaatttgatttggagcctttttgtactttgtcaaacgagtaacc 403
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttttgatagaaagttgtaatttgatttggagcctttttgtactttgtcaaacgagtaacc 558

                                                                       
Query: 404 taatctcgttagttccataatgtacttagctgcgttcatttcatgaccagacattgggag 463
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 taatctcgttagttccataatgtacttagctgcgttcatttcatgaccagacattgggag 618

                                                                       
Query: 464 aaatttagaagatttatcagagttagatgtttgattcgcgttagtagaagttgcagctat 523
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaatttagaagatttatcagagttagatgtttgattcgcgttagtagaagttgcagctat 678

                                                                       
Query: 524 catatgatccgtttttttaggacctgctgcgttgggcctgttatatttcggtccagagtt 583
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 catatgatccgtttttttaggacctgctgcgttgggcctgttatatttcggtccagagtt 738

                                                                       
Query: 584 acctggtttaaatctcaatggattctttctttgtggtcgtgttgctgcagagacatttct 643
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 acctggtttaaatctcaatggattctttctttgtggtcgtgttgctgcagagacatttct 798

                                                                       
Query: 644 cttggtagttgttcgcgccattattatttcacggcttcctttattgaaagtaactagttt 703
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 cttggtagttgttcgcgccattattatttcacggcttcctttattgaaagtaactagttt 858

                                                                       
Query: 704 cttccaatatgcaccaataatcacttntggttaaactgtttgtttaaccgtctccatcgg 763
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 859 cttccaatatgcaccaataatcactt-tggttaaactgtttgtttaaccgtctccatcgg 917

                                                                       
Query: 764 agagtcgatgtgcaatatctttaaagggaccaagttccttggcttactttttaaatattc 823
           ||||||||||||||||||| || ||||||| |||||||||| | ||||||||||||||||
Sbjct: 918 agagtcgatgtgcaatatc-ttcaagggacgaagttccttgtc-tactttttaaatattc 975

                     
Query: 824 agtattacct 833
           ||||||||||
Sbjct: 976 agtattacct 985


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7621
Number of Sequences: 1807
Number of extensions: 7621
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)