BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZB04FM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1794 1043 0.0 >3x_Contig1794 Length = 36744 Score = 1043 bits (526), Expect = 0.0 Identities = 556/562 (98%), Gaps = 3/562 (0%) Strand = Plus / Minus Query: 85 gttaaaggaacacgaaaaaaggaaaaagaaactgaagaaaagccattcataaacatgtca 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29650 gttaaaggaacacgaaaaaaggaaaaagaaactgaagaaaagccattcataaacatgtca 29591 Query: 145 atgtacgaattgaatatatcatttattcatctaatatacaattaattaatgcattagttg 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29590 atgtacgaattgaatatatcatttattcatctaatatacaattaattaatgcattagttg 29531 Query: 205 aaatcatagatctttatgaaatcaacattttgaagtttgtgtactattataaaattgctt 264 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29530 aaatcatagatccaaatgaaatcaacattttgaagtttgtgtactattataaaattgctt 29471 Query: 265 tacaatatcaactctataaatccataacatactgcaaagattatgataatgaagatcaca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29470 tacaatatcaactctataaatccataacatactgcaaagattatgataatgaagatcaca 29411 Query: 325 acaccagtaatataatgccaagtaggtgcaaacgtgaatcttgaaaacattaataacaaa 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29410 acaccagtaatataatgccaagtaggtgcaaacgtgaatcttgaaaacattaataacaaa 29351 Query: 385 gaccatgcaccgagaattaaggatatggataatgatatgaatatcatcgtcaaaatagaa 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29350 gaccatgcaccgagaattaaggatatggataatgatatgaatatcatcgtcaaaatagaa 29291 Query: 445 gtttcgttttctagttgtgtatcatcgttgagtgatttgaacaaagatgtcatgatacca 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29290 gtttcgttttctagttgtgtatcatcgttgagtgatttgaacaaagatgtcatgatacca 29231 Query: 505 atggttacgcctgtagtcaaacaggatattagcaatgaagaaacatagaagaaagatatc 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29230 atggttacgcctgtagtcaaacaggatattagcaatgaagaaacatagaagaaagatatc 29171 Query: 565 acctggtcatgctcgaactcatatattgattctgaatttttgttcttcgagttcccaaaa 624 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 29170 acctggtcatgctcgaactcatatattgattctgaa-ttttgttcttcgagttccc-aaa 29113 Query: 625 acttattcacgttcgtttcttt 646 ||||||||||| |||||||||| Sbjct: 29112 acttattcacg-tcgtttcttt 29092 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8967 Number of Sequences: 1807 Number of extensions: 8967 Number of successful extensions: 70 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)