BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZC03RM1.SCF screened BAC_end (976 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1727 827 0.0 >3x_Contig1727 Length = 17872 Score = 827 bits (417), Expect = 0.0 Identities = 458/469 (97%), Gaps = 2/469 (0%) Strand = Plus / Minus Query: 90 cttattgaaattgaatttcccgtccaaaacaggtacattcgaaagcaaattggaccccac 149 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5663 cttattgaaattgaatttcccgtccaaaacaggtacatt-gaaagcaaattggaccccac 5605 Query: 150 tagaaacgttcaacgtgttatgtgccaagaataatcttgagatagaatcattatcattta 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5604 tagaaacgttcaacgtgttatgtgccaagaataatcttgagatagaatcattatcattta 5545 Query: 210 cctggagcgtctccaccggtttggaaacgttacgagtatcccatgatactatcgtaccat 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5544 cctggagcgtctccaccggtttggaaacgttacgagtatcccatgatactatcgtaccat 5485 Query: 270 ccgaatagccagcaaataggtaatggtcatcacctgcaatgtgctggctcgttagagtga 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5484 ccgaatagccagcaaataggtaatggtcatcacctgcaatgtgctggctcgttagagtga 5425 Query: 330 cacatgcagatttacttgccggtaaaatatccaatatcttctttctgttatagatatcat 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5424 cacatgcagatttacttgccggtaaaatatccaatatcttctttctgttatagatatcat 5365 Query: 390 gaaacgtgatgataccagagtcgtgtccagcaaatacagctttcccctcagtattgtatt 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5364 gaaacgtgatgataccagagtcgtgtccagcaaatacagctttcccctcagtattgtatt 5305 Query: 450 ccttgctatggtccaatgcattgtacgatgtggtcgctggatttccctgtctatttgtca 509 | ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 5304 cgttgctatggtccaatgcattgtacgatgtggtcgctggatttccctggtaattggcca 5245 Query: 510 atgataatacaatttatgctattgtttgaattgagcgtatagacacatg 558 |||| |||||||||||||| || |||||||||||||||| ||||||||| Sbjct: 5244 atga-aatacaatttatgccatcgtttgaattgagcgtaaagacacatg 5197 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,670 Number of Sequences: 1807 Number of extensions: 13670 Number of successful extensions: 384 Number of sequences better than 1.0e-20: 1 length of query: 976 length of database: 10,358,551 effective HSP length: 16 effective length of query: 960 effective length of database: 10,329,639 effective search space: 9916453440 effective search space used: 9916453440 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)