BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZC04FM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1615 1067 0.0 >3x_Contig1615 Length = 14844 Score = 1067 bits (538), Expect = 0.0 Identities = 602/617 (97%), Gaps = 5/617 (0%) Strand = Plus / Minus Query: 86 tgaacaaattcgacagattgtttggtttttagaagctgcatcgatacttgctcctaaagg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8049 tgaacaaattcgacagattgtttggtttttagaagctgcatcgatacttgctcctaaagg 7990 Query: 146 tacggaatgctggacactaatcatcgatcttaaaaatcatcatatagacaacggtggaac 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7989 tacggaatgctggacactaatcatcgatcttaaaaatcatcatatagacaacggtggaac 7930 Query: 206 ccgttccctattctaatacccaccactctctcttgcgaagcaagtgatcaatatatttca 265 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7929 ccgttccctatacgaatacccaccactctctcttgcgaagcaagtgatcaatatatttca 7870 Query: 266 agatcattatccagaaagactatacaaatgtttaatctgcaatgtcccaaattctgcgtg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7869 agatcattatccagaaagactatacaaatgtttaatctgcaatgtcccaaattctgcgtg 7810 Query: 326 gacattcttgaaattagtgtacccactaatagaacccgaaccaagaaagaaaatccttta 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7809 gacattcttgaaattagtgtacccactaatagaacccgaaccaagaaagaaaatccttta 7750 Query: 386 taatgacccccttgaaatccatatagaatcagatcaattgggtgctgaatacggtggtag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7749 taatgacccccttgaaatccatatagaatcagatcaattgggtgctgaatacggtggtag 7690 Query: 446 attggatttcaattacgataactcgatttactggccggatttaatacagaccgttgaatc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7689 attggatttcaattacgataactcgatttactggccggatttaatacagaccgttgaatc 7630 Query: 506 aagaaagaaagtacantacgaaaagtttgaagccttgggtgcaaacgttgggataagag- 564 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7629 aagaaagaaagtacaatacgaaaagtttgaagccttgggtgcaaacgttgggataagaga 7570 Query: 565 atttgaaataaagag-aatacttaacaatgtaacgcgtacctaccatctacatacttatt 623 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 7569 atttgaaataaagagaaatacttaacaatgtaacgcgtacttaccatctacatacttatc 7510 Query: 624 aactttatgtttacctacttcattttttttccttaaatctggaaccctacgtaccatgat 683 ||||| ||||||||||||||| ||||||||||| ||||| || | |||||||||||||| Sbjct: 7509 aacttattgtttacctacttca-tttttttcctt-aatcttgatcgctacgtaccatgat 7452 Query: 684 atattttgttgataccg 700 ||| ||||||||||||| Sbjct: 7451 ata-tttgttgataccg 7436 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,975 Number of Sequences: 1807 Number of extensions: 16975 Number of successful extensions: 1793 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)