BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZD09FM1.SCF screened BAC_end (1143 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1802 404 e-112 >3x_Contig1802 Length = 45229 Score = 404 bits (204), Expect = e-112 Identities = 230/239 (96%) Strand = Plus / Minus Query: 121 tcttgaagaatgttgcatcatcaatcaggtaacttagcaattgacgattaaactaacagt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30121 tcttgaagaatgttgcatcatcaatcaggtaacttagcaattgacgattaaactaacagt 30062 Query: 181 aagatgtttgagcttacattnatatgttgcaacggaaccgaaagaaatcatcccaatgat 240 |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| Sbjct: 30061 aagatgtttgagcttacatttatatgttgtaacggaaccgaaagaaatcattccaatgat 30002 Query: 241 acaacctgcactttctccgaaataatgctgataaacaggcgtgagaaacagtagctctga 300 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30001 acaacctgcacttactccgaaataatgctgataaacaggcgtgagaaacagtagctctga 29942 Query: 301 gactgaataactcaacattcacccagcgatcagtttttctttagctatttcggtttatt 359 |||||||||||||||||||||| ||| |||||||| ||||||||||||| || |||||| Sbjct: 29941 gactgaataactcaacattcacacagtgatcagttattctttagctattccgctttatt 29883 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,024 Number of Sequences: 1807 Number of extensions: 10024 Number of successful extensions: 91 Number of sequences better than 1.0e-20: 1 length of query: 1143 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1127 effective length of database: 10,329,639 effective search space: 11641503153 effective search space used: 11641503153 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)