BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZE08RM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1785 870 0.0 >3x_Contig1785 Length = 37935 Score = 870 bits (439), Expect = 0.0 Identities = 506/523 (96%), Gaps = 4/523 (0%) Strand = Plus / Plus Query: 45 gcttcagacagctttactcgaaatgtaaactatattaaacatgtacactactcaatttac 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2925 gcttcagacagctttactcgaaatgtaaactatattaaacatgtacactactcaatttac 2984 Query: 105 acgttttagatgtattctaatgccagcttcggactttagaatcaaatgcttaaactgcca 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2985 acgttttagatgtattctaatgccagcttcggactttagaatcaaatgcttaaactgcca 3044 Query: 165 tatatgaatgagatcacgtgcgttgcatccgaaagactgtaaactaggattccctgagca 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3045 tatatgaatgagatcacgtgcgttgcatccgaaagactgtaaactaggattccctgagca 3104 Query: 225 gacagttatttcattactcttatagagtgcaaatgattaatatattacccgatcaacatg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3105 gacagttatttcattactcttatagagtgcaaatgattaatatattacccgatcaacatg 3164 Query: 285 agcacatcacttaacacgaagaacacaactaactacgtattcaagataagtatctccgta 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3165 agcacatcacttaacacgaagaacacaactaactacgtattcaagataagtatctccgta 3224 Query: 345 ttttctccggcccgtttagcagcatgtctgggattatactgacagaaaattcagtttttc 404 ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| Sbjct: 3225 ttttctccggcccgtttagcagcatgtctggattaatactgacagaaatttcagtttttc 3284 Query: 405 gaaagagaaatctcatgaaaaag-aaaaaaaaagctgcgaccatggcaatcagagggaaa 463 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 3285 gaaagagaaatctcatgaaaatgaaaaaaaaaagctgcgaccatggcaatcagagggaaa 3344 Query: 464 aaatggaatgatggataaggaaaattgataatgaaagttggaggattgaaaatcattatt 523 |||| |||||||||||||||||||||||||||||||||| || |||||||||||| || | Sbjct: 3345 aaatagaatgatggataaggaaaattgataatgaaagtt-gaagattgaaaatcaataat 3403 Query: 524 gggaaattttggcccttttgagggccagttaagttgcgattag 566 ||| ||||||| ||||||||| || |||| |||||||||||| Sbjct: 3404 tggagattttgg-ccttttgagtgcaagtt-agttgcgattag 3444 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8107 Number of Sequences: 1807 Number of extensions: 8107 Number of successful extensions: 74 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)