BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZE11RM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1707 1078 0.0 >3x_Contig1707 Length = 16216 Score = 1078 bits (544), Expect = 0.0 Identities = 619/640 (96%), Gaps = 3/640 (0%) Strand = Plus / Plus Query: 42 tccactcaacctcattgtactttttttctccagtttgcattgtagaagcagtgaaattga 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4529 tccactcaacctcattgtactttttttctccagtttgcattgtagaagcagtgaaattga 4588 Query: 102 tcaattgtcaaggatccctagtcgtcttccttaagacatgcctcccggggaacttatatt 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4589 tcaattgtcaaggatccctagtcgtcttccttaagacatgcctcccggggaacttatatt 4648 Query: 162 ttctaacctaaggtcaggatcaaggcctgttccaagggacagggatgccctgtcatcagt 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4649 ttctaacctaaggtcaggatcaaggcctgttccaagggacagggatgccctgtcatcagt 4708 Query: 222 gcaaagcgatgccatcagcaccaaatcttctgcaaggtataactttcaaggtaccggttc 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4709 gcaaagcgatgccatcagcaccaaatcttctgcaaggtataactttcaaggtaccggttc 4768 Query: 282 atctgatgcaacttctggtacgaatgttacaattagaaataatactttgagtatcggcgt 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4769 atctgatgcaacttctggtacgaatgttacaattagaaataatactttgagtatcggcgt 4828 Query: 342 cagctctcaaatgcaaggatctgcgttcaacggccctcggatgcagttatcgaccaatgg 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4829 cagctctcaaatgcaaggatctgcgttcaacggccctcggatgcagttatcgaccaatgg 4888 Query: 402 tttgaaaaatactcaatctaaagccctgcaggcgcaatcacaagatggttgtcaggatag 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4889 tttgaaaaatactcaatctaaagccctgcaggcgcaatcacaagatggttgtcaggatag 4948 Query: 462 caagaatattgcggataatgatagtgacgcagaagcgagaacagctaaaagatccctcga 521 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4949 taagaatattgcggataatgatagtgacgcagaagcgagaacagctaaaagatccctcga 5008 Query: 522 gttggaacttgctttttatgaagcaaggtttttcgaatgaacaagttatggtttacatat 581 |||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 5009 gttggaacttgcttttcatgaagcaagg-ttttcgaatgaacaagttatggttgacatat 5067 Query: 582 tattctctaagggtgccaaaaaaaggggatctggcctgaactaaaaacttacagaacttt 641 || | |||||||||| ||| |||| ||||||| |||||||||||||||||||||||| Sbjct: 5068 catccattaagggtgcc-aaagaaggtgatctgg-ctgaactaaaaacttacagaacttc 5125 Query: 642 ttccggattcaaaaatacaaagctttattttatattgaaa 681 | |||||| |||| ||| |||| | ||||| ||| ||||| Sbjct: 5126 tcccggatccaaagataaaaagttatatttcatagtgaaa 5165 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7344 Number of Sequences: 1807 Number of extensions: 7344 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)