BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZF01FM1.SCF screened BAC_end (882 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig954 1427 0.0 >3x_Contig954 Length = 3755 Score = 1427 bits (720), Expect = 0.0 Identities = 774/788 (98%), Gaps = 3/788 (0%) Strand = Plus / Plus Query: 87 cgcttaccgatgctatctctcccaaaatatacctttcgttcttgaagatcagtaattgcg 146 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 95 cgcttaccgatgctatctctccctatatatacctttcgttcttgaagatcagtaattgcg 154 Query: 147 tacgcaaattctccataacatttccttactacctcttcaacagaatgcttttccaaaagt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155 tacgcaaattctccataacatttccttactacctcttcaacagaatgcttttccaaaagt 214 Query: 207 gaagaaatatattccgtatcactgtgttcacaattttcaacagtatcatcattatacagt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 gaagaaatatattccgtatcactgtgttcacaattttcaacagtatcatcattatacagt 274 Query: 267 tccccgttatactgtagaaggtaacgatcttgtaccatgacgctttgtttcgtgaatggt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 tccccgttatactgtagaaggtaacgatcttgtaccatgacgctttgtttcgtgaatggt 334 Query: 327 gttcttaaagataatacagatgagaacaacatagcattaatttcagataacgatctcaat 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 gttcttaaagataatacagatgagaacaacatagcattaatttcagataacgatctcaat 394 Query: 387 gacgcatagtttggacctcttctcacgatatacggtatcagttcattaaataacgtatta 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gacgcatagtttggacctcttctcacgatatacggtatcagttcattaaataacgtatta 454 Query: 447 ctattacatgactgtattggtcctgttaggtctttctcgtatagttcttggaattcatca 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 ctattacatgactgtattggtcctgttaggtctttctcgtatagttcttggaattcatca 514 Query: 507 gtaagagttgatccaaatgatttaccaaaatatgccaaaataccacacataccaaactaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 gtaagagttgatccaaatgatttaccaaaatatgccaaaataccacacataccaaactaa 574 Query: 567 aagcgaccaactcaagtagcttattgtactctaattgaagtataacaactctacatgtaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 aagcgaccaactcaagtagcttattgtactctaattgaagtataacaactctacatgtaa 634 Query: 627 agctttattaccagaggggtccacctgagatgagatatatgtatattgacaacttttttt 686 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 635 agctttattaccagaggggtccacctgagatgagatatatgtatattgacaac-tttttt 693 Query: 687 ttttattttttcaggctgccaaacctttagaaataaatcaaacatgtaaataaagaacaa 746 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 ttttaatttttcaggctgccaaacctttagaaataaatcaaacatgtaaataaagaacaa 753 Query: 747 gattgactcttgatcgagaacgccattttacgaaaagaaccctagcgaatcgtaaatggt 806 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 gattgactcttgatcgagaacgccattttacgaaaagaaccctagcgaatcgtaaatgg- 812 Query: 807 tttcgaacccacagcgaaactggttttttacatttatagaggtgaacttttgtttattcc 866 ||||||||| ||||||||||| |||||||||||| ||||||| || | ||||||| || Sbjct: 813 tttcgaaccaacagcgaaact-gttttttacattcatagagggtgacatctgtttatccc 871 Query: 867 aaatggac 874 |||||||| Sbjct: 872 aaatggac 879 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,825 Number of Sequences: 1807 Number of extensions: 12825 Number of successful extensions: 259 Number of sequences better than 1.0e-20: 1 length of query: 882 length of database: 10,358,551 effective HSP length: 16 effective length of query: 866 effective length of database: 10,329,639 effective search space: 8945467374 effective search space used: 8945467374 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)