BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZF05FM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1399 987 0.0 >3x_Contig1399 Length = 7157 Score = 987 bits (498), Expect = 0.0 Identities = 582/606 (96%), Gaps = 3/606 (0%) Strand = Plus / Minus Query: 87 atctcgcaccccaatgtgatgggtctctacgaggtatgggaaaacaaatctgagttatat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4636 atctcgcaccccaatgtgatgggtctctacgaggtatgggaaaacaaatctgagttatat 4577 Query: 147 ttggtattggaatatgttgaaggtggtgaattgttcgactatttggtctcgaaggggaag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4576 ttggtattggaatatgttgaaggtggtgaattgttcgactatttggtctcgaaggggaag 4517 Query: 207 ttgccggaaagtgatgctatccattatttcaaacagatagtacaagctgtagcatactgc 266 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4516 ttgccggaaagtgaggctatccattatttcaaacagatagtacaagctgtagcatactgc 4457 Query: 267 catgggttcaatatttgtcatcgtgatttgaaaccagagaatttgcttttggataagaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4456 catgggttcaatatttgtcatcgtgatttgaaaccagagaatttgcttttggataagaaa 4397 Query: 327 aagagatctatcaagattgcagactttgggatggctgccctagagacttcggataaactg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4396 aagagatctatcaagattgcagactttgggatggctgccctagagacttcggataaactg 4337 Query: 387 ctggagacctcgtgtggctcaccacattatgcttctcctgaaatcgttctgggtcggaaa 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4336 ctggagacctcgtgtggctcaccacattatgcttctcctgaaatcgttctgggtcggaaa 4277 Query: 447 tatcatggatccccaagtgatgtttggtcctgtggtatcatcttgttcgccctgttgact 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4276 tatcatggatccccaagtgatgtttggtcctgtggtatcatcttgttcgccctgttgact 4217 Query: 507 gaacatttaccctttaacgacgataacgtcaagaaattgttgttggaaagtacagttcag 566 | |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 4216 ggacatttaccctttaacgacgataacgtcaagaaattgttgtt-gaaagtacag-tcag 4159 Query: 567 gaaaatattaaatgccccaatgtttattggtaaaggctaaaaatttaatttttagattcc 626 |||||||| | ||||||||||| |||| |||| |||||||| ||||||||| |||| ||| Sbjct: 4158 gaaaatatcagatgccccaatggttatcggtagaggctaaagatttaatttctagaatcc 4099 Query: 627 tgtgggtgaatcc-aatttaagaattacttttgaccaaatttttcaccatgatttgctga 685 || ||| |||| ||| |||||||||| |||||||||| || || ||||| ||||||| Sbjct: 4098 tggtggtagatccaaatagaagaattactattgaccaaatcttacagcatgagttgctga 4039 Query: 686 cgaaat 691 |||||| Sbjct: 4038 cgaaat 4033 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,485 Number of Sequences: 1807 Number of extensions: 12485 Number of successful extensions: 90 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)