BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZF05RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1337 1334 0.0 >3x_Contig1337 Length = 7771 Score = 1334 bits (673), Expect = 0.0 Identities = 697/704 (99%), Gaps = 1/704 (0%) Strand = Plus / Minus Query: 52 ctggtgataccaacggtatgattaaagtctgggatttagttaaacgtaattgtcaatgca 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7667 ctggtgataccaacggtatgattaaagtctgggatttagttaaacgtaattgtcaatgca 7608 Query: 112 ctattcaggaacatactacagctgttagagggctagatttccgtgtcactgatgaagaaa 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7607 ctattcaggaacatactacagctgttagagggctagatttccgtgtcactgatgaagaaa 7548 Query: 172 agggaacgctgcagttattatctggtggtagagacaatatcttaaatctcttcgagttta 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7547 agggaacgctgcagttattatctggtggtagagacaatatcttaaatctcttcgagttta 7488 Query: 232 attcgacgaaaaagtataagctactgaagaccatccctgtcatagaacaggtggaatcgt 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7487 attcgacgaaaaagtataagctactgaagaccatccctgtcatagaacaggtggaatcgt 7428 Query: 292 gtggatttacgcaggacccggatgtggtttactcagccggtggtggtgccatttaccaat 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7427 gtggatttacgcaggacccggatgtggtttactcagccggtggtggtgccatttaccaat 7368 Query: 352 tagtgtccttgtcaacaggaagagtattaaagaaaacagcaaaacctattgaagagctat 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7367 tagtgtccttgtcaacaggaagagtattaaagaaaacagcaaaacctattgaagagctat 7308 Query: 412 ttattattggtacactatgtatcctgaacggaactaagcagtacttggtattttcagatc 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7307 ttattattggtacactatgtatcctgaacggaactaagcagtacttggtattttcagatc 7248 Query: 472 aaactttgttcctaatagatgttgaatcagctttacaatcggaatctgaagtaattgaag 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7247 aaactttgttcctaatagatgttgaatcagctttacaatcggaatctgaagtaattgaag 7188 Query: 532 tggaaaataagattgcaggtaatcatggtaccattgcagatataagaatcgttggtccaa 591 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 7187 tggaaaataagattgcaggtaatcatggtaccattgcagatataagattcgttggtccaa 7128 Query: 592 aacgggataaattagcattagctactaactctcctactcttagaataattcc-accccaa 650 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 7127 aacgggataaattagcattagctactaactctcctactcttagaataattccaaccccaa 7068 Query: 651 cttcttcggaggaagagttcgaaaatggggagaacaaanaaacatttcctattggagtaa 710 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 7067 cttcttcggaggaagagttcgaaaatggggagaacaaagaaacatttcctattgaagtaa 7008 Query: 711 agatgtacgagggtcatacggatctccttaactttttggatgcc 754 ||||||||||||||||||||||||| || |||| |||||||||| Sbjct: 7007 agatgtacgagggtcatacggatctactcaactctttggatgcc 6964 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5966 Number of Sequences: 1807 Number of extensions: 5966 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)