BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZG07FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig763 533 e-151 >3x_Contig763 Length = 2933 Score = 533 bits (269), Expect = e-151 Identities = 293/301 (97%) Strand = Plus / Plus Query: 99 tattgacatgacttctattttgttattatttttacttttatttgggcttcagaaattgat 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2633 tattgacatgacttctattttgttattatttttacttttatttgggcttcagaaattgat 2692 Query: 159 tagtatgtttgtagaattattactttctgagtaattgtttagtattattacatcgccaga 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2693 tagtatgtttgtagaattattactttctgagtaattgtttagtattattacatcgccaga 2752 Query: 219 tatttcattttttttttggctttatgtttttaagttttacaatgtagtgtttttatcttc 278 ||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2753 tatttcagaatatttttggctttatgtttttaacttttacaatgtagtgtttttatcttc 2812 Query: 279 ctttagtttcgttctgtactgatatcattatttggtattgccagcaattttgttaattcg 338 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2813 ctttagtttcgttctgtactgatatcattatttggtatttccagcaattttgttaattcg 2872 Query: 339 acaatacttttcattattgacggtcatggtaaaggaaccaaattttgattaatcactagc 398 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 2873 acaatacttttcattattgacgggcatgggaaaggaaccaaattttgattaatcactagc 2932 Query: 399 a 399 | Sbjct: 2933 a 2933 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,755 Number of Sequences: 1807 Number of extensions: 16755 Number of successful extensions: 195 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)