BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC5ZG07FM1.SCF screened BAC_end
         (937 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig763                                                          533   e-151

>3x_Contig763 
          Length = 2933

 Score =  533 bits (269), Expect = e-151
 Identities = 293/301 (97%)
 Strand = Plus / Plus

                                                                        
Query: 99   tattgacatgacttctattttgttattatttttacttttatttgggcttcagaaattgat 158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2633 tattgacatgacttctattttgttattatttttacttttatttgggcttcagaaattgat 2692

                                                                        
Query: 159  tagtatgtttgtagaattattactttctgagtaattgtttagtattattacatcgccaga 218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2693 tagtatgtttgtagaattattactttctgagtaattgtttagtattattacatcgccaga 2752

                                                                        
Query: 219  tatttcattttttttttggctttatgtttttaagttttacaatgtagtgtttttatcttc 278
            |||||||   | ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2753 tatttcagaatatttttggctttatgtttttaacttttacaatgtagtgtttttatcttc 2812

                                                                        
Query: 279  ctttagtttcgttctgtactgatatcattatttggtattgccagcaattttgttaattcg 338
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2813 ctttagtttcgttctgtactgatatcattatttggtatttccagcaattttgttaattcg 2872

                                                                        
Query: 339  acaatacttttcattattgacggtcatggtaaaggaaccaaattttgattaatcactagc 398
            ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2873 acaatacttttcattattgacgggcatgggaaaggaaccaaattttgattaatcactagc 2932

             
Query: 399  a 399
            |
Sbjct: 2933 a 2933


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,755
Number of Sequences: 1807
Number of extensions: 16755
Number of successful extensions: 195
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)