BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZH04FM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1128 476 e-134 >3x_Contig1128 Length = 4759 Score = 476 bits (240), Expect = e-134 Identities = 267/275 (97%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 83 cttttcttcttcgaaatgagcagaatcagttggccaaatacccaagaaaatggtaaatcc 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4485 cttttcttcttcgaaatgagcagaatcagttggccaaatacccaagaaaatggtaaatcc 4544 Query: 143 ggcttcttctgcagcaggacccaaaatttgtaaagtgttacaatcagaagcagcatatac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4545 ggcttcttctgcagcaggacccaaaatttgtaaagtgttacaatcagaagcagcatatac 4604 Query: 203 tttgaccttgtttgtgtaacccttcaaagtttcgaaatcagctaaataatcatccttttg 262 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4605 tttgaccttggaggtgtaacccttcaaagtttcgaaatcagctaaataatcatccttttg 4664 Query: 263 cttacaagaaccatcgt-gggtcttaacacctaagttgaatgcaagctcaccaacagcag 321 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4665 cttacaagaaccatcgtggggtcttaacacctaagntgaatgcaagctcaccaacagcag 4724 Query: 322 caacagttgaagcaccggccaacaaagtggcagaa 356 |||||||| |||||||||||||| |||||||||| Sbjct: 4725 caacagtttgagcaccggccaacatagtggcagaa 4759 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,014 Number of Sequences: 1807 Number of extensions: 12014 Number of successful extensions: 208 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)