BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZH05RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1360 1326 0.0 >3x_Contig1360 Length = 8285 Score = 1326 bits (669), Expect = 0.0 Identities = 734/745 (98%), Gaps = 8/745 (1%) Strand = Plus / Minus Query: 48 ttccttgactgaaaagattaaggttaagatagtttaaacattacaagatgacttcagaaa 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3968 ttccttgactgaaaagattaaggttaagatagtttaaacattacaagatgacttcagaaa 3909 Query: 108 taaaagaaaaagaacaatttgaaatcggcgtcgttggtgacactgagactggatccatcg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3908 taaaagaaaaagaacaatttgaaatcggcgtcgttggtgacactgagactggatccatcg 3849 Query: 168 aggtttatgatggagaaatcaaaaacgttaaatcacaacaattggaaggtactga-gcat 226 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3848 aggtttatgatggagaaatcaaaaacgttaaatcacaacaattggaaggtactgaagcat 3789 Query: 227 gctgttggccttgatctcttccaagaagttttggacagtgacttgaaatacgatgacaaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3788 gctgttggccttgatctcttccaagaagttttggacagtgacttgaaatacgatgacaaa 3729 Query: 287 gagtactccaaaatcagacgtaagattgatacctggttattaccagtgctttgtatcaca 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3728 gagtactccaaaatcagacgtaagattgatacctggttattaccagtgctttgtatcaca 3669 Query: 347 tacatgcttcagttcttggataagttatcgttgaattatgcttctgcatattccatgaag 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3668 tacatgcttcagttcttggataagttatcgttgaattatgcttctgcatattccatgaag 3609 Query: 407 gaggatcttggtcttgttgggaatgagtacggtaatattgccgctatcttcaatgtcggg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3608 gaggatcttggtcttgttgggaatgagtacggtaatattgccgctatcttcaatgtcggg 3549 Query: 467 tatttgatcggttccattccagcaaactacgttattcaaaaacttccagtggccaaatac 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3548 tatttgatcggttccattccagcaaactacgttattcaaaaacttccagtggccaaatac 3489 Query: 527 acaggtgtcgccttattcgtttgggcaattttgttgattggacatattggagctacgaac 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3488 acaggtgtcgccttattcgtttgggcaattttgttgattggacatattggagctacgaac 3429 Query: 587 tactcatcaatgatggcattgagattcttattaggattgatggaagcatcaatctttcca 646 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3428 tactcatcaatgatggcattgagattcttattaggattgatggaagcatcaatctctcca 3369 Query: 647 tccaatatgatgatgtgtgccatgttctacaacaagagag-acaaccattcagaatgtgt 705 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 3368 tccaatatgatgatgtgtgccatgttttacaacaagagagaacaaccattcagaatgtgt 3309 Query: 706 acattttttgtctatgaatgggtgtagcgacaatggttgggtgcgctattggccctacag 765 ||| ||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| | Sbjct: 3308 aca-tttttgtctatgaat-ggtgtagcgacaatggtt-ggtgcgctattgg-cctacgg 3253 Query: 766 gttggggtcatgcccactaacactt 790 ||| |||||||| |||||||||||| Sbjct: 3252 gtt-gggtcatg-ccactaacactt 3230 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7263 Number of Sequences: 1807 Number of extensions: 7263 Number of successful extensions: 65 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)